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08E140C01_z5_2013_Ig3399_v2_scaffold_2603

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_1
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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2..1393
DNA (1392bp) protein (464aa)
hypothetical protein id=7201813 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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1434..3011
DNA (1578bp) protein (526aa)
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=GWF2_RIF_IGX_33_9_curated
Periplasmic protease id=4005456 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
carboxyl-terminal protease
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_3
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3057..3869
DNA (813bp) protein (271aa)
Zinc transporter ZupT n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2J0_9FIRM rbh
Zinc transporter ZupT {ECO:0000256|HAMAP-Rule:MF_00548, ECO:0000256|SAAS:SAAS00012146}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
zinc transporter ZupT; K07238 zinc transporter, ZIP family
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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4029..6650
DNA (2622bp) protein (874aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=7716965 bin=BACIGN_2 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
ATP-dependent DNA helicase, RecQ family
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6693..7256
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUX6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93113.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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7249..8235
DNA (987bp) protein (329aa)
pheS; Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Phenylalanine--tRNA ligase alpha subunit id=1796560 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Phenylalanyl-tRNA synthetase subunit alpha
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8243..10129)
DNA (1887bp) protein (629aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
arginine decarboxylase (EC:4.1.1.19)
arginine decarboxylase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D4FB
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10524..11228)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003606255
Uncharacterized protein {ECO:0000313|EMBL:GAL86018.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_9
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(11241..12149)
DNA (909bp) protein (303aa)
zinc-binding dehydrogenase family oxidoreductase (EC:1.-.-.-)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYA2_9FLAO rbh
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_10
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12193..13014)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWZ1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU19006.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
abortive infection protein; K07052
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13119..14129)
DNA (1011bp) protein (337aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T1_HALH1 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEE50535.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14113..14337)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T2_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50536.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_13
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14350..14958)
DNA (609bp) protein (203aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T3_HALH1 rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEE50537.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15059..15724)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T4_HALH1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE50538.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15820..16671)
DNA (852bp) protein (284aa)
Transcriptional regulator, AraC family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T5_HALH1 rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEE50539.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2603_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

16941..17522
DNA (582bp) protein (194aa)
Rod shape-determining protein MreB id=2290646 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
mreB; Rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 16 items

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