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08E140C01_z5_2013_Ig3399_v2_scaffold_1144

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_1
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

2..460
DNA (459bp) protein (153aa)
ISGsu4, transposase Tax=RBG_16_Chloroflexi_64_43_curated
ISGsu4, transposase id=3784307 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
transposase IS116/IS110/IS902 family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(680..1540)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ER32_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94216.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1537..3021)
DNA (1485bp) protein (495aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN93552.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93552.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN95_SORC5
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3276..4448
DNA (1173bp) protein (391aa)
BNR repeat domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXM6_SORC5
BNR repeat domain protein {ECO:0000313|EMBL:CAN95530.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
BNR repeat-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_5
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4453..5460)
DNA (1008bp) protein (336aa)
Putative gluconeogenesis factor n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y0G2_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5480..6703)
DNA (1224bp) protein (408aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF01098.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6769..7776
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFT0_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF02420.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_8
unknown

Not on your lists

7855..8577
DNA (723bp) protein (241aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1144_9
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(8569..8910)
DNA (342bp) protein (114aa)
Gamma-carboxymuconolactone decarboxylase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Gamma-carboxymuconolactone decarboxylase-like protein id=14426399 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
Gamma-carboxymuconolactone decarboxylase-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8974..10047)
DNA (1074bp) protein (358aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWM8_SORCE rbh
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_11
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10176..11663
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G101_9DELT
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11670..12500)
DNA (831bp) protein (277aa)
BNR repeat domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXM6_SORC5
BNR repeat domain protein {ECO:0000313|EMBL:CAN95530.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
collagen triple helix repeat protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12603..13853
DNA (1251bp) protein (417aa)
hutI; imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] rbh
Imidazolonepropionase {ECO:0000256|SAAS:SAAS00083112, ECO:0000313|EMBL:CAN94454.1}; EC=3.5.2.7 {ECO:0000256|SAAS:SAAS00083112, ECO:0000313|EMBL:CAN94454.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Imidazolonepropionase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F257_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_14
unknown

Not on your lists

13853..15046
DNA (1194bp) protein (398aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1144_trna_1
unknown

Not on your lists

15105..15177
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15264..16247)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B8E8_TURPD
Uncharacterized protein {ECO:0000313|EMBL:AKF11528.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_16
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

16675..18057
DNA (1383bp) protein (461aa)
L-lysine 6-transaminase; K03918 L-lysine 6-transaminase [EC:2.6.1.36] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
L-lysine 6-transaminase (EC:2.6.1.36); K03918 L-lysine 6-transaminase [EC:2.6.1.36] id=7718056 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
L-lysine 6-transaminase; K03918 L-lysine 6-transaminase [EC:2.6.1.36]
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..19545
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZV5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36178.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_18
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19985..21448)
DNA (1464bp) protein (488aa)
ammonium transporter n=1 Tax=Fischerella muscicola RepID=UPI000380E965
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
ammonium transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_19
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21622..23160)
DNA (1539bp) protein (513aa)
Nif-specific regulatory protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9K9_DESTA rbh
Nif-specific regulatory protein rbh
Nif-specific regulatory protein {ECO:0000313|EMBL:AFM26250.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23369..25558
DNA (2190bp) protein (730aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP99_KORVE
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

25759..26430
DNA (672bp) protein (224aa)
glycine cleavage H-protein Tax=RBG_13_Acidobacteria_68_16_curated
Glycine cleavage H-protein id=3110014 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
glycine cleavage H-protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_22
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

26584..28194
DNA (1611bp) protein (537aa)
periplasmic sensor signal transduction histidine kinase Tax=RBG_13_Acidobacteria_68_16_curated
periplasmic sensor signal transduction histidine kinase id=24479407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
periplasmic sensor signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_23
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

28191..29522
DNA (1332bp) protein (444aa)
Response regulator n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMC5_IGNAJ id=5224794 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Response regulator Tax=RBG_13_Acidobacteria_68_16_curated
two component sigma-54 specific Fis family transcriptional regulator rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

29633..30031
DNA (399bp) protein (133aa)
Peptidase, zinc-dependent n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INE4_KORVE id=5224795 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase, zinc-dependent Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase, zinc-dependent; K06974
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_25
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(30160..30927)
DNA (768bp) protein (256aa)
Deca-heme C-type cytochrome-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBB3_ANADF
deca-heme C-type cytochrome-like protein Tax=RBG_13_Chloroflexi_60_13_curated
deca-heme C-type cytochrome-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_26
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

32666..34846
DNA (2181bp) protein (727aa)
hypothetical protein id=14631295 bin=bin9_gal15 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34869..35867)
DNA (999bp) protein (333aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3J1_SORC5 rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:CAN94587.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35864..37759)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3I7_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN94586.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1144_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37756..38481)
DNA (726bp) protein (242aa)
Putative ABC-2 type transport system permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3I3_SORC5
ABC-2 type ABC transporter permease
Putative ABC-2 type transport system permease protein {ECO:0000313|EMBL:CAN94585.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 33 in total

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