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08E140C01_z5_2013_Ig3399_v2_scaffold_1294

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..1023
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YF23_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF07876.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1282..1623
DNA (342bp) protein (114aa)
50S ribosomal protein L22 n=2 Tax=Sorangium cellulosum RepID=RL22_SORC5
rplV; hypothetical protein; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1639..2331
DNA (693bp) protein (231aa)
30S ribosomal protein S3 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RS3_SORC5 rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2345..2761
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL16_SORC5
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2758..2967
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=2 Tax=Sorangium cellulosum RepID=RL29_SORC5
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2971..3285
DNA (315bp) protein (105aa)
30S ribosomal protein S17 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGI4_SORC5
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3294..3662
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZI8_STIAD
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3662..3985
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL24_SORC5
rplX; hypothetical protein; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3994..4731
DNA (738bp) protein (246aa)
50S ribosomal protein L5 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGH3_SORC5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5008..5334
DNA (327bp) protein (109aa)
30S ribosomal protein S8 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK90_SORCE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
30S ribosomal protein S8
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5334..5927
DNA (594bp) protein (198aa)
50S ribosomal protein L6 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGG2_SORC5
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5957..6328
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK22_SORCE
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6353..6898
DNA (546bp) protein (182aa)
30S ribosomal protein S5 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQL7_SORCE
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
30S ribosomal protein S5
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6895..7083
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9Z6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF10625.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
50S ribosomal protein L30
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7086..7574
DNA (489bp) protein (163aa)
50S ribosomal protein L15 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIC5_SORCE
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7591..8919
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK77_SORCE rbh
preprotein translocase subunit SecY rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8923..9189
DNA (267bp) protein (89aa)
Translation initiation factor IF-1 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGD6_SORC5
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:CAN98111.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_18
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

9200..9319
DNA (120bp) protein (40aa)
50S ribosomal protein L36 n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8W5_THELD
LSU ribosomal protein L36P; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9355..9735
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM93_SORCE
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
30S ribosomal protein S13
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_20

Not on your lists


9751..10158
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK18_SORCE
30S ribosomal protein S11
Marine sediment metagenome DNA, contig: S01H1_L10112 {ECO:0000313|EMBL:GAF95349.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10177..10806
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQL2_SORCE rbh
30S ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..11935
DNA (1023bp) protein (341aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIC2_SORCE rbh
DNA-directed RNA polymerase subunit alpha rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11954..12469
DNA (516bp) protein (172aa)
50S ribosomal protein L17 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL17_SORC5
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_24
unknown

Not on your lists

12629..13285
DNA (657bp) protein (219aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1294_25
unknown

Not on your lists

comp(13316..14104)
DNA (789bp) protein (263aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1294_26
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(14322..16565)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037CC1B7
class III aminotransferase Tax=RBG_13_Aminicenantes_62_12_curated
hypothetical protein; K13622 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_27
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16562..20950)
DNA (4389bp) protein (1463aa)
Aminotransferase class-III n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6Z782_SEGRD
class III aminotransferase Tax=RBG_13_Bacteroidetes_46_8_curated
class III aminotransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_28
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21331..23436
DNA (2106bp) protein (702aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08V25_STIAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE70107.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1294_29
unknown

Not on your lists

23627..26068
DNA (2442bp) protein (814aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1294_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26318..26800
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC76_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96150.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 32 in total

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