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08E140C01_z5_2013_Ig3399_v2_scaffold_1385

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_1
unknown

Not on your lists

comp(117..671)
DNA (555bp) protein (185aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1385_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..1549
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pantothenate kinase (EC:2.7.1.33) rbh
Type III pantothenate kinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJW0_SORCE rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1562..2560
DNA (999bp) protein (333aa)
Putative hemin permease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQJ2_SORC5 rbh
Vitamin B12 ABC transporter, permease component BtuC {ECO:0000313|EMBL:EYF08128.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
bhuU; hemin permease; K02015 iron complex transport system permease protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_4
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2505..3935)
DNA (1431bp) protein (477aa)
class I and II aminotransferase; K00814 alanine transaminase [EC:2.6.1.2] Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
class I and II aminotransferase; K00814 alanine transaminase [EC:2.6.1.2]
Aminotransferase class I and II id=4981105 bin=GWA2_Elusi_like_61_42 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_5
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4328..6274
DNA (1947bp) protein (649aa)
Putative 5-nucleotidase n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D489_DEIDV rbh
5'-nucleotidase {ECO:0000313|EMBL:EYB66348.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
5'-nucleotidase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6293..7846)
DNA (1554bp) protein (518aa)
pcp; pyroglutamyl-peptidase I (EC:3.4.19.3) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pcp; pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HU22_9PSED
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7878..9410)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC74_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62542.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_8
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9729..10097)
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BRJ3_DESAD
rrf1; response regulator of HMC operon Rrf1 Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
response regulator receiver protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_9
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10094..11956)
DNA (1863bp) protein (621aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS domain S-box Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
PAS/PAC sensor signal transduction histidine kinase id=2293094 bin=GWB2_Ignavibacteria_35_12 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_10
unknown

Not on your lists

comp(12002..12619)
DNA (618bp) protein (206aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1385_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12628..15744)
DNA (3117bp) protein (1039aa)
4Fe-4S ferredoxin; K03388 heterodisulfide reductase subunit A [EC:1.8.98.1]
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9I7_AMMDK
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACX52966.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_12
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15755..16894)
DNA (1140bp) protein (380aa)
formate dehydrogenase; K00122 formate dehydrogenase [EC:1.2.1.2] Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Formate dehydrogenase; K00125 formate dehydrogenase, beta subunit [EC:1.2.1.2]
Formate dehydrogenase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JDR7_DESDE
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_13
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16938..17366)
DNA (429bp) protein (143aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JW82_DESFR
methyl-viologen-reducing hydrogenase delta subunit Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
methyl-viologen-reducing hydrogenase delta subunit
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_14
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17366..20758)
DNA (3393bp) protein (1131aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5ABB1 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31280.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20764..21921)
DNA (1158bp) protein (386aa)
Cyclic nucleotide-binding protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPS2_DESK7
cyclic nucleotide-binding protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_16
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

22247..23614
DNA (1368bp) protein (456aa)
Fis family transcriptional regulator n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3D441
Fis family transcriptional regulator Tax=RBG_13_RIF03_48_7_curated
transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_17
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

23735..24241
DNA (507bp) protein (169aa)
Heterodisulfide reductase, subunit C n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BHK2_9EURY
Heterodisulfide reductase, subunit C
Heterodisulfide reductase, subunit C {ECO:0000313|EMBL:AGK61792.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_18
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24245..25126
DNA (882bp) protein (294aa)
Heterodisulfide reductase, subunit B n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BFI3_9EURY
Heterodisulfide reductase, subunit B Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Heterodisulfide reductase, subunit B
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_19
unknown

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comp(25208..25828)
DNA (621bp) protein (207aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1385_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25875..26792)
DNA (918bp) protein (306aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF04180.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27068..28507
DNA (1440bp) protein (480aa)
Hypothetical secreted peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FT27_SORC5
Secreted trypsin-like serine protease {ECO:0000313|EMBL:EYF04064.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
peptidase
08E140C01_z5_2013_Ig3399_v2_scaffold_1385_22
unknown

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28703..28762
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 22 items

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