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08E140C01_z5_2013_Ig3399_v2_scaffold_1482

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113..460
DNA (348bp) protein (116aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9Z9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05942.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(472..1278)
DNA (807bp) protein (269aa)
PE-PGRS family protein n=5 Tax=Mycobacterium tuberculosis complex RepID=G0TK58_MYCCP
Putative 5'-nucleotidase family protein {ECO:0000313|EMBL:CAN97208.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PE_PGRS4; PE-PGRS family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_3
unknown

Not on your lists

1668..3278
DNA (1611bp) protein (537aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1482_4
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(3484..4578)
DNA (1095bp) protein (365aa)
RING finger protein 6 n=1 Tax=Cricetulus griseus RepID=G3H174_CRIGR
RING finger protein 6 {ECO:0000313|EMBL:EGV96479.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_5
unknown

Not on your lists

comp(5129..6148)
DNA (1020bp) protein (340aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1482_6
Acidiplasma sp. MBA-1, Acidiplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

6275..6682
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE49509.1}; TaxID=1293648 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Acidiplasma.;" source="Acidiplasma sp. MBA-1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6643..7185
DNA (543bp) protein (181aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBD9_9EURY
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EMA55287.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_8
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..9178
DNA (2001bp) protein (667aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBZ6_DESAA
PAS domain S-box Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
PAS/PAC sensor hybrid histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..10974
DNA (1725bp) protein (575aa)
protein kinase (EC:2.7.11.1) rbh
Protein kinase {ECO:0000313|EMBL:CAN91005.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN91005.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETG2_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..12304
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWU4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36370.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12304..12867
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFH0_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL54626.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12889..13368)
DNA (480bp) protein (160aa)
hypothetical protein; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFE0_CORCM
Lactoylglutathione lyase {ECO:0000313|EMBL:CDH46607.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_13
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13405..14289)
DNA (885bp) protein (295aa)
Protein serine/threonine phosphatase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL43_ROSCS
Ser/Thr phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ABU58213.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14799..16979
DNA (2181bp) protein (727aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18) Tax=GWC2_Rokubacteria_70_16_curated
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18) rbh
1,4-alpha-glucan branching enzyme GlgB id=4849340 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17019..18962
DNA (1944bp) protein (648aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ88_RUBXD rbh
alpha amylase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_16
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

19074..21020
DNA (1947bp) protein (649aa)
malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] Tax=RBG_16_Chloroflexi_50_9_curated
GlgB; 1,4-alpha-glucan branching enzyme; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] rbh
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1W2_PELTS rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_17
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

21279..21779
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGN4_SYNFM
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21966..24083)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9K2_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24141..26771)
DNA (2631bp) protein (877aa)
protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5Y1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05231.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26917..29190
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXD6_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP35283.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_21
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29551..30603
DNA (1053bp) protein (351aa)
hypothetical protein Tax=CG_Delta_07
Putative membrane protein id=3415076 bin=GWA1_Deltaproteobacteria_52_35 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1482_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30610..31458)
DNA (849bp) protein (283aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN96424.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN96424.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH81_SORC5
Displaying 22 items

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