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08E140C01_z5_2013_Ig3399_v2_scaffold_1782

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_1
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202..1041
DNA (840bp) protein (280aa)
ribBA_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC:3.5.4.25) Tax=RifOxyA12_full_Proteobacteria_58_15_curated
ribBA_[H]; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC:3.5.4.25)
Riboflavin biosynthesis protein ribAB n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KSW9_9GAMM
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1043..3073)
DNA (2031bp) protein (677aa)
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34); K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] Tax=CG_Rhodocyc_01
fadH; NADPH-dependent 2,4-dienoyl-CoA reductase; K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] rbh
2,4-dienoyl-CoA reductase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGT4_9DELT rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3093..4085)
DNA (993bp) protein (331aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZV7_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4155..6068)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEE2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99480.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..7737)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7E0_SORCE rbh
HtrA protease/chaperone protein {ECO:0000313|EMBL:EYF06723.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7734..8618)
DNA (885bp) protein (295aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
tRNA pseudouridine synthase A n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAK6_SORCE
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8623..9666)
DNA (1044bp) protein (348aa)
Peptidase M29 aminopeptidase II n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NNX4_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:EYF04326.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
peptidase M29 aminopeptidase II
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_8
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(9718..11445)
DNA (1728bp) protein (576aa)
MutT/NUDIX family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW48_9BACT
MutT/NUDIX family protein {ECO:0000313|EMBL:EHO42953.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
MutT/NUDIX family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(11527..12981)
DNA (1455bp) protein (485aa)
Aminoacyl-histidine dipeptidase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A6S9_MELRP
Uncharacterized protein {ECO:0000313|EMBL:KDA54464.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
aminoacyl-histidine dipeptidase
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_10
unknown

Not on your lists

comp(13859..15001)
DNA (1143bp) protein (381aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1782_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15102..16304
DNA (1203bp) protein (401aa)
Acyltransferase 3 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG6_OPITP
Uncharacterized protein {ECO:0000313|EMBL:KFN43059.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
acyltransferase 3
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

16349..17440
DNA (1092bp) protein (364aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Predicted protein id=3030732 bin=GWF2_Methylomirabilis_70_14 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17450..18127)
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHQ6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07917.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1782_14
unknown

Not on your lists

18568..19779
DNA (1212bp) protein (404aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1782_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19787..20863)
DNA (1077bp) protein (359aa)
Metal-dependent hydrolase {ECO:0000313|EMBL:EWY38771.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
membrane-bound metal-dependent hydrolase id=4859957 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
conserved membrane protein of unknown function
Displaying 15 items

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