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08E140C01_z5_2013_Ig3399_v2_scaffold_5653

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1245
DNA (1245bp) protein (415aa)
exported transglycosylase (EC:3.2.1.-); K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] rbh
Exported transglycosylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GGG0_SORC5 rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EYF00300.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1347..5246)
DNA (3900bp) protein (1300aa)
protein kinase (EC:2.7.11.1) rbh
Protein kinase {ECO:0000313|EMBL:CAN90158.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN90158.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHT8_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5354..6256)
DNA (903bp) protein (301aa)
miaA; hypothetical protein; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT {ECO:0000255|HAMAP-Rule:
tRNA dimethylallyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=MIAA_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_4
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6253..8022)
DNA (1770bp) protein (590aa)
DNA mismatch repair protein MutL n=1 Tax=Geobacter sp. (strain M21) RepID=MUTL_GEOSM
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_5
unknown

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comp(8024..8641)
DNA (618bp) protein (206aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_5653_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8818..9075)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=2 Tax=Sorangium cellulosum RepID=RL27_SORC5
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9086..9397)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL21_SORC5
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_8
unknown

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9486..10853
DNA (1368bp) protein (456aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_5653_9
unknown

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comp(10893..11165)
DNA (273bp) protein (91aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_5653_10
unknown

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11369..11632
DNA (264bp) protein (88aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_5653_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11640..12788
DNA (1149bp) protein (383aa)
Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDI8_ANASK
Type III secretion inner membrane protein {ECO:0000313|EMBL:AKF10679.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
type III secretion system apparatus protein YscQ/HrcQ; K03225 type III secretion protein SctQ
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12785..13336
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGM3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98134.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_5653_13
unknown

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comp(13138..13560)
DNA (423bp) protein (141aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_5653_14
unknown

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13592..14623
DNA (1032bp) protein (344aa)

This feature has no annotations

Displaying 14 items

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