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08E140C01_z5_2013_Ig3399_v2_scaffold_2114

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..532
DNA (531bp) protein (177aa)
Dynein regulation protein LC7 n=2 Tax=Sorangium cellulosum RepID=S4XM28_SORCE
Gliding motility protein MglA {ECO:0000313|EMBL:EYF05873.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
dynein regulation protein LC7
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

542..1129
DNA (588bp) protein (196aa)
Putative MglA1 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESU1_SORC5 rbh
Gliding motility protein MglA {ECO:0000313|EMBL:AKF07770.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
MglA1 protein; K06883 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1134..1937)
DNA (804bp) protein (268aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Diaminopimelate epimerase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAX6_SORCE
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2052..2810
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMG7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03594.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3237..3650
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMH1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03593.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_6
unknown

Not on your lists

3647..4009
DNA (363bp) protein (121aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2114_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4105..4737)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7R9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41467.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4849..5811
DNA (963bp) protein (321aa)
Magnesium chelatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKI3_SORCE rbh
magnesium chelatase rbh
Magnesium chelatase {ECO:0000313|EMBL:AGP32951.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5756..6910
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNN9_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF06537.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6910..9081
DNA (2172bp) protein (724aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNN5_SORC5 rbh
Transglutaminase-like enzyme {ECO:0000313|EMBL:EYF06536.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9665..11008)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMT7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03558.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_12
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11005..11715)
DNA (711bp) protein (237aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=CG_Delta_06
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
ribulose-phosphate 3-epimerase n=1 Tax=Laceyella sacchari RepID=UPI0003B7AD62
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11784..12224
DNA (441bp) protein (147aa)
acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase {ECO:0000313|EMBL:CAN98358.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAN98358.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative acetyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMT0_SORC5
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12233..13726)
DNA (1494bp) protein (498aa)
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] rbh
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796, ECO:0000313|EMBL:CAN99337.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glycine dehydrogenase (Decarboxylating) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDC6_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13729..14256)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDD1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99339.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_16
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14196..15275)
DNA (1080bp) protein (360aa)
lipid-A-disaccharide kinase (EC:2.7.1.130) Tax=RBG_16_Armatimonadetes_58_9_curated
tetraacyldisaccharide 4''-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJC8_AZOSU
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15282..16007)
DNA (726bp) protein (242aa)
glycosyltransferase (EC:2.4.-.-); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EY89_SORC5 rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EYF03280.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16020..16820)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5Z0_SORCE
Molybdopterin binding motif protein {ECO:0000313|EMBL:EYF02000.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_19
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(16807..17196)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MXK6_9CYAN
response regulator receiver protein Tax=RBG_16_Planctomycetes_41_13_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
08E140C01_z5_2013_Ig3399_v2_scaffold_2114_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17193..18299)
DNA (1107bp) protein (369aa)
Adenylate cyclase {ECO:0000313|EMBL:AKF07335.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GAF sensor signal transduction histidine kinase id=2767091 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
GAF sensor signal transduction histidine kinase
Displaying 20 items

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