ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2160

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2518)
DNA (2517bp) protein (839aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLW9_SORCE
Ribonucleotide reductase of class II (Coenzyme B12-dependent) {ECO:0000313|EMBL:EYF01353.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_2
unknown

Not on your lists

3054..4361
DNA (1308bp) protein (436aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2160_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4425..5249
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN52_SORCE rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:AKF04425.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5252..5824
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKY6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33842.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_5
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5828..6493)
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036836DD rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6632..7621)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWC9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF05788.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8002..9270
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FC64_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN91630.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..10017)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FUH2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98632.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_9
unknown

Not on your lists

comp(10295..11128)
DNA (834bp) protein (278aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2160_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11555..11884
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00036B7713
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2160_11
unknown

Not on your lists

11939..13783
DNA (1845bp) protein (615aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2160_12
unknown

Not on your lists

13856..15628
DNA (1773bp) protein (591aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2160_13
unknown

Not on your lists

comp(15642..16946)
DNA (1305bp) protein (435aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2160_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16943..17989)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBM8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41755.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 14 items

View Taxonomy