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08E140C01_z5_2013_Ig3399_v2_scaffold_2294

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_1
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(530..1858)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8U8_THIV6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL73416.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_2
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2016..3230)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L9R4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST37944.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3693..5522)
DNA (1830bp) protein (610aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QMV8_METTR
Putative 3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:AHW72458.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_4
unknown

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comp(5519..5935)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003658C54
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5932..7125)
DNA (1194bp) protein (398aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III related protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G4Q6_SORC5
3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein {ECO:0000313|EMBL:KIE45701.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
3-oxoacyl-(acyl-carrier-protein) synthase III related protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7388..7753
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGK9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM74969.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_7
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7755..8444
DNA (690bp) protein (230aa)
Putative positive regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDS8_9DELT
Putative positive regulator {ECO:0000313|EMBL:EDM75967.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
regulatory protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_8
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8452..8922
DNA (471bp) protein (157aa)
anti-anti-sigma factor n=1 Tax=Nonomuraea coxensis RepID=UPI000376235A
Anti-sigma factor antagonist {ECO:0000313|EMBL:EYT82058.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
anti-sigma-factor antagonist
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9026..9643
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003707C03
Anti-sigma B factor RsbT {ECO:0000313|EMBL:AKF09913.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Ser/Thr protein kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9640..10209
DNA (570bp) protein (190aa)
rsbX1; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:CAN93770.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CAN93770.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Phosphoserine phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSF9_SORC5
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10175..10690
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI0003638060
Anti-sigma B factor RsbT {ECO:0000313|EMBL:AKF02873.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_12
unknown

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comp(11373..12578)
DNA (1206bp) protein (402aa)
Aromatic hydrocarbon degradation protein n=1 Tax=Thauera sp. 63 RepID=N6YAL3_9RHOO
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13271..13591
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GB28_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92947.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13678..14649
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW00_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF04807.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14646..16445
DNA (1800bp) protein (600aa)
subtilisin-like serine protease (EC:3.4.21.-) rbh
Subtilisin-like serine protease {ECO:0000313|EMBL:CAN92949.1}; EC=3.4.21.- {ECO:0000313|EMBL:CAN92949.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Subtilisin-like serine protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GB32_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2294_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16710..17000
DNA (291bp) protein (97aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GB34_SORC5
Displaying 16 items

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