ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2319

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_1
unknown

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2319_2
unknown

Not on your lists

comp(235..2253)
DNA (2019bp) protein (673aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2319_3
unknown

Not on your lists

comp(2263..3534)
DNA (1272bp) protein (424aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2319_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3680..4276)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0Q4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38076.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4399..5277)
DNA (879bp) protein (293aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9Z7_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN99262.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_6
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..6717)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLD5_MICPN
SCP-like extracellular protein Tax=CG_Delta_07
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6717..7673)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWX5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93988.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7804..9273
DNA (1470bp) protein (490aa)
lgt1; prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] rbh
Prolipoprotein diacylglyceryl transferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GR81_SORC5 rbh
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:CAN90555.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_9
unknown

Not on your lists

comp(9283..9960)
DNA (678bp) protein (226aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2319_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10560..11792)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUN7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34308.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11795..12904)
DNA (1110bp) protein (370aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EV47_SORC5
hypothetical protein; K13888 macrolide-specific efflux protein MacA
Putative membrane protein {ECO:0000313|EMBL:CAN91161.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_12
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12901..14238)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B52CE3
Outer membrane protein {ECO:0000313|EMBL:EHQ51291.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
outer membrane efflux protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_13
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14238..14999)
DNA (762bp) protein (254aa)
Possible ABC transporter, ATP binding protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z622_9SYNE
Possible ABC transporter, ATP binding protein {ECO:0000313|EMBL:EAQ69547.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
antimicrobial peptide ABC transporter ATPase
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_14
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15211..16236
DNA (1026bp) protein (342aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103) rbh
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1004785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (strain Black Sea 11).;"
L-threonine 3-dehydrogenase n=1 Tax=Alteromonas macleodii (strain Black Sea 11) RepID=K0CT50_ALTMS rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16243..17184)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=3 Tax=Myxococcus xanthus RepID=Q1CYI7_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:EYF00958.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17181..19241)
DNA (2061bp) protein (687aa)
protein-arginine deiminase; K01481 protein-arginine deiminase [EC:3.5.3.15]
Protein-arginine deiminase type III protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U6B2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF00959.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_17
unknown

Not on your lists

comp(19207..19878)
DNA (672bp) protein (224aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2319_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20123..21937)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4K5_SORCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF02250.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22107..22955)
DNA (849bp) protein (283aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
proC; hypothetical protein; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] rbh
ProC protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8S3_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23207..25459
DNA (2253bp) protein (751aa)
Cytochrome C family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBD3_ANADF rbh
cytochrome C family protein rbh
Cytochrome C family protein {ECO:0000313|EMBL:ABS26029.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2319_21
unknown

Not on your lists

25489..26193
DNA (705bp) protein (235aa)

This feature has no annotations

Displaying 21 items

View Taxonomy