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08E140C01_z5_2013_Ig3399_v2_scaffold_2363

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(185..1174)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQX5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90511.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1171..2823)
DNA (1653bp) protein (551aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQX2_SORC5
Serine/threonine protein kinase Pkn7 {ECO:0000313|EMBL:EYF05440.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2835..3707)
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF04333.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_4
unknown

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comp(3897..4052)
DNA (156bp) protein (52aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2363_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4210..4965)
DNA (756bp) protein (252aa)
Gliding motility protein MglA {ECO:0000313|EMBL:AKF07047.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GTPase-like protein id=2915758 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
mglA; cell polarity determinant GTPase MglA; K06883
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5515..7338
DNA (1824bp) protein (608aa)
Patatin n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV91_ROSS1
putative alpha-beta hydrolase superfamily esterase Tax=RifOxyA12_full_Proteobacteria_58_15_curated
patatin
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_7
unknown

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comp(7354..7548)
DNA (195bp) protein (65aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2363_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7596..8615)
DNA (1020bp) protein (340aa)
Amidohydrolase family protein n=2 Tax=Myxococcus xanthus RepID=Q1DCI7_MYXXD
amidohydrolase family protein; K07045
Amidohydrolase family protein {ECO:0000313|EMBL:ABF85980.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_9
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

8970..10214
DNA (1245bp) protein (415aa)
L-fucose isomerase 2 domain protein id=4667218 bin=GWF2_Melioribacter_38_21 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
L-fucose isomerase-like protein
Tax=BJP_IG2102_Coriobacteriales_64_17
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10231..12033)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRE1_SORCE rbh
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:AKF08502.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_11
unknown

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12273..12680
DNA (408bp) protein (136aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2363_12
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13127..14722
DNA (1596bp) protein (532aa)
Penicillin-binding protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M3J3_9BACL
Penicillin-binding protein {ECO:0000313|EMBL:EST52907.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14731..16293)
DNA (1563bp) protein (521aa)
citF; Citrate lyase subunit alpha; K01643 citrate lyase subunit alpha / citrate CoA-transferase [EC:4.1.3.6 2.8.3.10] Tax=RBG_16_Ignavibacteria_34_14_curated
citF; Citrate lyase subunit alpha; K01643 citrate lyase subunit alpha / citrate CoA-transferase [EC:4.1.3.6 2.8.3.10]
citrate lyase subunit alpha n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003AACD40
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_14
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16290..17504)
DNA (1215bp) protein (405aa)
citE; Citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citrate lyase subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIQ1_IGNAJ
Citrate lyase subunit beta {ECO:0000313|EMBL:AFH48858.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2363_15
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17550..18752)
DNA (1203bp) protein (401aa)
Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lys; K01705 homoaconitate hydratase [EC:4.2.1.36]
homoaconitate hydratase family protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
homoaconitate hydratase family protein id=17051236 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Displaying 15 items

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