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08E140C01_z5_2013_Ig3399_v2_scaffold_2863

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_1
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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912..2123
DNA (1212bp) protein (404aa)
transposase IS116/IS110/IS902 Tax=RifOxyA12_full_Proteobacteria_58_15_curated
transposase id=4897968 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transposase IS116/IS110/IS902 family protein; K07486 transposase
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_2
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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2868..3404
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=3781635 bin=GWA2_Deltaproteo_65_63 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=CG_Delta_02
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3430..3903)
DNA (474bp) protein (158aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=H4VFL7_ECOLX
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN92716.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_4
unknown

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comp(3946..4524)
DNA (579bp) protein (193aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2863_5
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(4641..5438)
DNA (798bp) protein (266aa)
Kef-type K+ transport system, predicted NAD-binding component n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CH64_9CLOT
ion transport 2 domain-containing protein
Tax=BJP_IG2102_Coriobacteriales_64_17
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_6
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5414..7057)
DNA (1644bp) protein (548aa)
Ion transport protein n=2 Tax=Psychrobacter RepID=Q1QAP6_PSYCK
Ion transport protein
Ion transporter {ECO:0000313|EMBL:AGP49065.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7395..11669)
DNA (4275bp) protein (1425aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RPOC_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2863_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11681..14107)
DNA (2427bp) protein (809aa)
rpoB; DNA-directed RNA polymerase (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; S
DNA-directed RNA polymerase subunit beta n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RPOB_SORC5
Displaying 8 items

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