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08E140C01_z5_2013_Ig3399_v2_scaffold_3100

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_1
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(3..899)
DNA (897bp) protein (299aa)
Major facilitator superfamily MFS_1 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P092_9BACT
major facilitator superfamily MFS_1 Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
major facilitator superfamily MFS_1
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1328..2359)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6A5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF04318.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2359..5067)
DNA (2709bp) protein (903aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6A8_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN92670.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5232..6950)
DNA (1719bp) protein (573aa)
UPI0003CE4B1B related cluster n=1 Tax=unknown RepID=UPI0003CE4B1B rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY71142.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
radical SAM domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_5
unknown

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7130..7606
DNA (477bp) protein (159aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3100_6
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7619..8926)
DNA (1308bp) protein (436aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P4J6_AZOS1
Alpha-amylase {ECO:0000313|EMBL:KFI20134.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
alpha-amylase-related protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_7

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comp(8986..9690)
DNA (705bp) protein (235aa)
Uncharacterized conserved protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5V7_9BACT
Uncharacterized conserved protein {ECO:0000313|EMBL:ADI22831.1}; TaxID=723589 species="Bacteria; environmental samples.;" source="uncultured nuHF2 cluster bacterium HF0500_31B05.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_trna_2
unknown

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comp(9968..10040)
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_trna_1
unknown

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comp(10092..10165)
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10308..12218
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP34_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP34279.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3100_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12235..13140)
DNA (906bp) protein (302aa)
Response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHW8_SORC5
response regulator
Response regulator {ECO:0000313|EMBL:CAN90168.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 11 items

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