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08E140C01_z5_2013_Ig3399_v2_scaffold_3152

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..2138)
DNA (2136bp) protein (712aa)
CoA-binding domain protein n=1 Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXF1_BACT2 id=5223885 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
CoA-binding domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
CoA-binding protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_2
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2334..3611
DNA (1278bp) protein (426aa)
beta-lactamase hcpE precursor (EC:3.5.2.6); K07126
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJI7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM73974.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3623..4813)
DNA (1191bp) protein (397aa)
dinitrogenase reductase activating glycohydrolase; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-]
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9PQQ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY40528.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_4
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4813..5316)
DNA (504bp) protein (168aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QGD0_DESB2
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADK83642.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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5487..5858
DNA (372bp) protein (124aa)
ftsW; cell division protein FtsW
hypothetical protein id=1246623 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5851..6993
DNA (1143bp) protein (381aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
histidine kinase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B47CF2
periplasmic sensor signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..7825)
DNA (819bp) protein (273aa)
amiB; N-acetylmuramoyl-L-alanine amidase precursor (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CAN91053.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CAN91053.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETZ5_SORC5
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_8
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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8140..9780
DNA (1641bp) protein (547aa)
N-acetylglucosaminidase domain-and ChW repeat-containing cell wall hydrolase n=3 Tax=Clostridium acetobutylicum RepID=F7ZXU3_CLOAT
hypothetical protein Tax=CG_Delta_07
lytD; N-acetylglucosaminidase domain- and ChW repeat-containing cell wall hydrolase
08E140C01_z5_2013_Ig3399_v2_scaffold_3152_9
unknown

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9823..10887
DNA (1065bp) protein (355aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3152_10
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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10950..12851
DNA (1902bp) protein (634aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G710_GEOUR
hypothetical protein Tax=CG_Delta_07
hypothetical protein
Displaying 10 items

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