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08E140C01_z5_2013_Ig3399_v2_scaffold_3228

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13..642)
DNA (630bp) protein (210aa)
Uncharacterized vancomycin resistance protein-like protein {ECO:0000313|EMBL:ABG04781.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

931..2652
DNA (1722bp) protein (574aa)
protein kinase (EC:2.7.11.1) rbh
Protein kinase {ECO:0000313|EMBL:CAN94697.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94697.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8W3_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2804..3457
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Nasonia vitripennis RepID=K7IMU9_NASVI
BNR repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EYF00306.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3536..7693)
DNA (4158bp) protein (1386aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKP4_SORCE rbh
Fis family transcriptional regulator rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:AGP32360.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7781..8980)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVE3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08017.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9406..10149
DNA (744bp) protein (248aa)
GGDEF domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEV4_SORC5 rbh
GGDEF domain-containing protein rbh
GGDEF domain protein {ECO:0000313|EMBL:CAN93061.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10364..12202
DNA (1839bp) protein (613aa)
RpsA3 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESM2_SORC5 rbh
rpsA3; hypothetical protein; K02945 small subunit ribosomal protein S1 rbh
RpsA3 protein {ECO:0000313|EMBL:CAN97399.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_8
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12247..13533)
DNA (1287bp) protein (429aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Tyrosine--tRNA ligase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2J7_ANATU
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_9
unknown

Not on your lists

comp(13598..14545)
DNA (948bp) protein (316aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3228_trna_1
unknown

Not on your lists

14678..14751
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_10
unknown

Not on your lists

14879..15433
DNA (555bp) protein (185aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3228_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15435..16277)
DNA (843bp) protein (281aa)
Protein serine/threonine phosphatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJP5_SORCE rbh
protein serine/threonine phosphatase rbh
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AGP32736.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16368..16925)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHW8_SORCE
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17144..19336
DNA (2193bp) protein (731aa)
GTP pyrophosphokinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPD9_SORCE rbh
GTP pyrophosphokinase rbh
GTP pyrophosphokinase {ECO:0000313|EMBL:AGP32478.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19340..20554)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXM4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37106.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_trna_2
unknown

Not on your lists

20769..20840
DNA (72bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21040..22497
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y494_SORCE rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:CAN96325.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22595..23341
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEW1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93064.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23472..24371)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEW4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93065.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24428..25420)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEW7_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF07414.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25575..26951)
DNA (1377bp) protein (459aa)
Signal recognition particle receptor FtsY n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEW9_SORC5 rbh
ftsY; cell division membrane protein; K03110 fused signal recognition particle receptor rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27020..28840)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEX1_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN93068.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28943..29779
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEX3_SORC5
PBS lyase HEAT repeat-like domain protein {ECO:0000313|EMBL:EYF07417.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
cpcE; hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3228_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29884..30615
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEX4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93070.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 24 items

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