ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_3271

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_1
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..355
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JE81_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG73939.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376..1140
DNA (765bp) protein (255aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (stra
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LH47_HALO1
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1274..2212
DNA (939bp) protein (313aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF07448.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Phosphonate ABC transporter substrate-binding protein id=3475381 bin=GWA2_OP3_52_12 species=Paenibacillus sp. Aloe-11 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
putative phosphonate-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2234..3025
DNA (792bp) protein (264aa)
Organic solvent ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLB2_SORCE rbh
organic solvent ABC transporter ATP-binding protein rbh
Organic solvent ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP32570.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3129..4259
DNA (1131bp) protein (377aa)
Putative ABC transport system substrate-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8B6_SORC5 rbh
ABC transport system substrate-binding protein rbh
Putative ABC transport system substrate-binding protein {ECO:0000313|EMBL:CAN94641.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_6
unknown

Not on your lists

4261..4758
DNA (498bp) protein (166aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3271_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4890..8039
DNA (3150bp) protein (1050aa)
prc1; C-terminal processing peptidase (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
C-terminal processing peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKP6_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF08842.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_8
unknown

Not on your lists

8036..8578
DNA (543bp) protein (181aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3271_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8809..9795
DNA (987bp) protein (329aa)
RND family efflux transporter MFP subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBM9_MYXSD
RND family efflux transporter MFP subunit
Hemolysin D {ECO:0000313|EMBL:AKF80312.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9802..12894
DNA (3093bp) protein (1031aa)
Acriflavin resistance protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMK0_HALO1
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:KFE66368.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
08E140C01_z5_2013_Ig3399_v2_scaffold_3271_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12948..13820
DNA (873bp) protein (291aa)
histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYU3_SORC5
Displaying 11 items

View Taxonomy