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08E140C01_z5_2013_Ig3399_v2_scaffold_3308

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_1
Neosartorya fischeri, Neosartorya, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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comp(3..335)
DNA (333bp) protein (111aa)
Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) RepID=B7GB28_PHATC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAW19603.1}; TaxID=331117 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Neosartorya.;" source="Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL; 181) (Aspergillus fischerianus).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_2
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

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457..1521
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037F824A
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1554..2705
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYN5_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP37589.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2653..4209
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSS0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33633.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4341..4817
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06507.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_6
unknown

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comp(4873..6249)
DNA (1377bp) protein (459aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3308_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6332..6934
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LWP9_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY17699.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7008..8120
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LWP8_HALO1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACY17698.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8180..8773)
DNA (594bp) protein (198aa)
Outer membrane polysaccharide exporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETQ5_SORC5
wza1; outer membrane polysaccharide exporter; K01991 polysaccharide export outer membrane protein
Outer membrane polysaccharide exporter {ECO:0000313|EMBL:CAN91030.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8824..10194
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNW9_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP34121.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10195..10929)
DNA (735bp) protein (245aa)
glycosyltransferase (EC:2.-.-.-) rbh
Glycosyltransferase {ECO:0000313|EMBL:CAN91039.1}; EC=2.-.-.- {ECO:0000313|EMBL:CAN91039.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETT9_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11200..11649
DNA (450bp) protein (150aa)
Anti-sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETT5_SORC5
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:CAN91038.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3308_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11726..12376
DNA (651bp) protein (217aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative macrolide efflux ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein; K02004 putative ABC transport system permease protein
Displaying 13 items

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