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08E140C01_z5_2013_Ig3399_v2_scaffold_3885

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..765)
DNA (765bp) protein (255aa)
Extracellular cysteine-rich protein, putative n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LZY8_TALSN
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF09337.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_2
unknown

Not on your lists

comp(759..1106)
DNA (348bp) protein (116aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3885_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1740..3029)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVW1_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF07756.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3026..3658)
DNA (633bp) protein (211aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GYG7_SORC5
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN97238.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_5
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3852..5963
DNA (2112bp) protein (704aa)
putative lipoprotein Tax=CG_Delta_07
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6102..8225
DNA (2124bp) protein (708aa)
Leucine aminopeptidase-related protein {ECO:0000313|EMBL:AKF05159.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_7
unknown

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8240..8701
DNA (462bp) protein (154aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3885_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8724..10256
DNA (1533bp) protein (511aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05158.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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10383..11705
DNA (1323bp) protein (441aa)
hypothetical protein Tax=GWC1_Treponema_61_84_curated
Putative uncharacterized protein id=4552028 bin=GWF2_Planctomycete_41_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211 rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_10
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11721..12653)
DNA (933bp) protein (311aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZE8_THEOJ
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_11
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12684..13649)
DNA (966bp) protein (322aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase central region n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4K2_GEODF
Transketolase, B protein {ECO:0000313|EMBL:ACM19728.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13646..14512)
DNA (867bp) protein (289aa)
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
Transketolase subunit A {ECO:0000313|EMBL:ABQ24706.1}; EC=2.2.1.1 {ECO:0000313|EMBL:ABQ24706.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Transketolase domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4K1_GEODF rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14591..15739
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA18_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP39633.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

15796..17397
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AA195 rbh
Permease {ECO:0000313|EMBL:KIJ74843.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_15
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17405..17983)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036E09CD
Uncharacterized protein {ECO:0000313|EMBL:KJY36662.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3885_16
unknown

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comp(18020..19039)
DNA (1020bp) protein (340aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3885_17
unknown

Not on your lists

19042..19263
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 17 items

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