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08E140C01_z5_2013_Ig3399_v2_scaffold_6774

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1207
DNA (1206bp) protein (402aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNZ2_SORCE rbh
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1204..2424
DNA (1221bp) protein (407aa)
Cell division protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI51_SORC5 rbh
Cell division protein FtsW {ECO:0000313|EMBL:EYF02387.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ftsW; cell division protein; K03588 cell division protein FtsW rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_3
unknown

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comp(2256..2681)
DNA (426bp) protein (142aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_6774_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2849..3469
DNA (621bp) protein (207aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQW9_SORCE
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3469..4860
DNA (1392bp) protein (464aa)
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8) rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI31_SORCE rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4880..5845
DNA (966bp) protein (322aa)
Cell division protein FtsQ n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI62_SORC5
ftsQ; cell division protein; K03589 cell division protein FtsQ
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00228532}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6035..6889
DNA (855bp) protein (285aa)
Cell division protein ftsA n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK78_SORCE
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6859..7173
DNA (315bp) protein (105aa)
Cell division protein ftsA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI66_SORC5
ftsA; cell division protein FtsA; K03590 cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7296..8543
DNA (1248bp) protein (416aa)
Cell division protein FtsZ n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI71_SORC5 rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_10
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8772..9203)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMD0_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18582.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_11
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9547..9981
DNA (435bp) protein (145aa)
PhnB protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SFG7_9DELT
PhnB protein {ECO:0000313|EMBL:ERK87220.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
DGPF domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_12
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9988..10425)
DNA (438bp) protein (146aa)
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
Glyoxalase/bleomycin resistance protein/dioxygenase id=1794237 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

10562..11434
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family id=3778702 bin=GWF2_Lentisphaerae_57_35 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
transcription activator, effector binding; K13652 AraC family transcriptional regulator Tax=GWF2_Lentisphaerae_57_35_curated
AraC family transcriptional regulator; K13652 AraC family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_6774_14
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11643..12680
DNA (1038bp) protein (346aa)
Peptidase alpha-lytic pro domain-containing protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PEQ2_STRVO
Peptidase alpha-lytic pro domain-containing protein {ECO:0000313|EMBL:AEM83533.1}; Flags: Precursor;; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
peptidoglycan-binding protein
Displaying 14 items

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