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08E140C01_z5_2013_Ig3399_v2_scaffold_863

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_863_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..905
DNA (903bp) protein (301aa)
Squalene/phytoene synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZ81_CORCM
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:AFE06422.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_2
unknown

Not on your lists

902..1471
DNA (570bp) protein (190aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_3
unknown

Not on your lists

comp(1560..2123)
DNA (564bp) protein (188aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_4
unknown

Not on your lists

comp(2274..2375)
DNA (102bp) protein (34aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_5
Vibrio sp. DCR 1-4-12, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2519..3292
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Leptospira santarosai RepID=UPI0002E3DC09
Protein kinase {ECO:0000313|EMBL:KII79512.1}; TaxID=1461323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. DCR 1-4-12.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_863_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3391..4368
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXJ6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM81584.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
SCP-like extracellular
08E140C01_z5_2013_Ig3399_v2_scaffold_863_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4372..6276)
DNA (1905bp) protein (635aa)
putative acyl-CoA dehydrogenase (EC:1.3.8.1) rbh
Acyl-CoA dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ6_9DELT rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AKF05088.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_8
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6422..7345)
DNA (924bp) protein (308aa)
Putative (R)-specific enoyl-CoA hydratase, MaoC-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFJ5_9DELT
Putative (R)-specific enoyl-CoA hydratase, MaoC-like protein {ECO:0000313|EMBL:EDM75367.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
MaoC domain-containing protein dehydratase
08E140C01_z5_2013_Ig3399_v2_scaffold_863_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7433..9706
DNA (2274bp) protein (758aa)
prkA1; protein kinase (EC:2.7.11.1) rbh
Protein kinase {ECO:0000313|EMBL:CAN93939.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93939.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWJ6_SORC5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_863_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9709..10980
DNA (1272bp) protein (424aa)
Amino acid permease n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKU0_MYXFH rbh
amino acid permease rbh
Amino acid permease {ECO:0000313|EMBL:AEI62755.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_11

Not on your lists

comp(11047..11913)
DNA (867bp) protein (289aa)
Protein HflC n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1R4_9BACT
Marine sediment metagenome DNA, contig: S01H1_L06138 {ECO:0000313|EMBL:GAF71866.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protease subunit, stomatin/prohibitin
08E140C01_z5_2013_Ig3399_v2_scaffold_863_12
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(11915..12913)
DNA (999bp) protein (333aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVM7_DESAD
protease FtsH subunit HflK Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_863_13
unknown

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comp(13121..13594)
DNA (474bp) protein (158aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13718..14998
DNA (1281bp) protein (427aa)
Hypothetical secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWJ1_SORC5 rbh
hypothetical protein rbh
Hypothetical secreted protein {ECO:0000313|EMBL:CAN93937.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_15
unknown

Not on your lists

comp(14899..15219)
DNA (321bp) protein (107aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15321..19292)
DNA (3972bp) protein (1324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0D1_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP36373.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19322..19954
DNA (633bp) protein (211aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FKQ2_SORC5
Transporter {ECO:0000313|EMBL:KGY16201.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_863_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20072..20905
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBL5_SORC5
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Uncharacterized protein {ECO:0000313|EMBL:CAN96060.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21056..23098
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMQ9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_863_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23202..23534
DNA (333bp) protein (111aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_863_21
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24914
DNA (1314bp) protein (438aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGN8_ANASK rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RifOxyA12_full_Proteobacteria_58_15_curated
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_863_22
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24933..28028
DNA (3096bp) protein (1032aa)
Heavy metal efflux pump CzcA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) IPR5_ANADE">RepID=Q2IPR5_ANADE rbh
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABC80795.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28087..29019
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNL3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF06244.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_863_24
unknown

Not on your lists

comp(29036..29182)
DNA (147bp) protein (49aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_863_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29671..32916
DNA (3246bp) protein (1082aa)
Putative exported peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GP48_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF11739.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
exported peptidase
08E140C01_z5_2013_Ig3399_v2_scaffold_863_26
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(32979..35438)
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Callithrix jacchus RepID=F7ABF1_CALJA
Uncharacterized protein {ECO:0000313|EMBL:KKS57595.1}; TaxID=1619039 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
uncharacterized LOC100849123
08E140C01_z5_2013_Ig3399_v2_scaffold_863_27
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35916..37073
DNA (1158bp) protein (386aa)
M23 peptidase domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UL77_MYXSD
yebA8; M23 peptidase domain-containing protein Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
M23 peptidase domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_863_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37105..38502
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUY9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91144.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_863_29
unknown

Not on your lists

39021..39200
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 29 items

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