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08E140C01_z5_2013_Ig3399_v2_scaffold_4090

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_1
Aliivibrio fischeri, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..7613)
DNA (7611bp) protein (2537aa)
Ig domain protein group 2 domain protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZ70_ACISM rbh
Ig domain protein, group 2 domain protein rbh
Ig domain protein, group 2 domain protein {ECO:0000313|EMBL:ACH63789.1}; TaxID=388396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Vibrio fischeri (strain MJ11).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_2
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8182..9534)
DNA (1353bp) protein (451aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3K0_DESTA
NAD(FAD)-dependent dehydrogenase
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:AFM24141.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_3
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9946..12003)
DNA (2058bp) protein (686aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Urocanate hydratase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LH96_HALO1
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12288..13238)
DNA (951bp) protein (317aa)
FHA and GGDEF domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJ67_SORC5
FHA/GGDEF domain-containing protein
FHA and GGDEF domain protein {ECO:0000313|EMBL:CAN91922.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13345..15132
DNA (1788bp) protein (596aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G4J7_SORC5 rbh
sigma-54 dependent transcriptional regulator rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAN98911.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15386..15601
DNA (216bp) protein (72aa)
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y666_RAMTT
LysR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_7
unknown

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comp(15534..16415)
DNA (882bp) protein (294aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_4090_8
unknown

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16884..17204
DNA (321bp) protein (107aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_4090_9

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17616..19010
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PDC7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH74403.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two-component system sensor histidine kinase/response regulator, hybrid (one-component system)
08E140C01_z5_2013_Ig3399_v2_scaffold_4090_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19005..21158)
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7P6_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN91557.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 10 items

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