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08E140C01_z5_2013_Ig3399_v2_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 429 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_104_1
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(170..4876)
DNA (4707bp) protein (1569aa)
glycoside hydrolase family 8 protein (EC:3.2.1.-); K01238 [EC:3.2.1.-] rbh
CHU large protein {ECO:0000313|EMBL:ABG60674.1}; EC=3.2.1.- {ECO:0000313|EMBL:ABG60674.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
hypothetical protein, partial n=1 Tax=Cytophaga aurantiaca RepID=UPI00035FE7CD rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_104_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5177..6505
DNA (1329bp) protein (443aa)
Sun; tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D62C48 related cluster n=1 Tax=unknown RepID=UPI0003D62C48
08E140C01_z5_2013_Ig3399_v2_scaffold_104_3
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6840..7202)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D65D6
hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_104_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7654..8484)
DNA (831bp) protein (277aa)
M48 family peptidase (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog id=3870829 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Heat shock protein HtpX Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_104_5
unknown

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comp(8881..9249)
DNA (369bp) protein (123aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_6
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(9396..12380)
DNA (2985bp) protein (995aa)
PREDICTED: mucin-17-like n=1 Tax=Sorex araneus RepID=UPI0003314D15
uncharacterized LOC767240
laminin G domain-containing protein Tax=RBG_13_RIF03_48_7_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_104_7
unknown

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comp(12403..14685)
DNA (2283bp) protein (761aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_8
unknown

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14906..15022
DNA (117bp) protein (39aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_9
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

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comp(15414..20987)
DNA (5574bp) protein (1858aa)
Brain-specific homeobox protein like protein n=1 Tax=Tupaia chinensis RepID=L9KXF7_TUPCH rbh
Brain-specific homeobox protein like protein {ECO:0000313|EMBL:ELW65852.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.;" source="Tupaia chinensis (Chinese tree shrew).;"
uncharacterized LOC763824 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_104_10
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(21578..22954)
DNA (1377bp) protein (459aa)
protease Do (EC:3.4.21.107)
Protease Do id=4428181 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
MucD Tax=GWF2_Nitrospirae_44_13_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_104_11
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

comp(23023..24345)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7W1_DESTA
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_104_12
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24342..25871)
DNA (1530bp) protein (510aa)
gliding motility ABC transporter auxillary protein Tax=CG_Desulfob_01
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like id=3235158 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
gliding motility ABC transporter auxillary protein
08E140C01_z5_2013_Ig3399_v2_scaffold_104_13
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25874..26650)
DNA (777bp) protein (259aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ39_SYNFM
multi-copper enzyme maturation ABC transporter permease Tax=GWC2_Deltaproteobacteria_42_11_curated
multi-copper enzyme maturation ABC-type transporter permease; K01992 ABC-2 type transport system permease protein
08E140C01_z5_2013_Ig3399_v2_scaffold_104_14
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26640..27590)
DNA (951bp) protein (317aa)
ABC transporter Tax=CG_Desulfob_01
ABC transporter related id=3235154 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_104_15
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27610..28743)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HR74_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
dnaJ; chaperone hsp40, co-chaperone with dnak; K03686 molecular chaperone DnaJ
08E140C01_z5_2013_Ig3399_v2_scaffold_104_16
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(29293..30936)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAX8_DEFDS
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFOXYC2_FULL_RIF01_39_67_curated
groEL; chaperonin GroEL; K04077 chaperonin GroEL
08E140C01_z5_2013_Ig3399_v2_scaffold_104_17
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(30993..31280)
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037BAB75
groS; chaperone Hsp10 (GroES), part of GroE chaperone system Tax=RBG_16_Zixibacteria_50_21_curated
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
08E140C01_z5_2013_Ig3399_v2_scaffold_104_18
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31316..33247)
DNA (1932bp) protein (644aa)
Chaperone protein DnaK id=3333328 bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=GWF2_Lentisphaerae_57_35_curated
chaperone protein DnaK
08E140C01_z5_2013_Ig3399_v2_scaffold_104_19
unknown

Not on your lists

comp(33472..34062)
DNA (591bp) protein (197aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_20
unknown

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comp(34095..34232)
DNA (138bp) protein (46aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_21
unknown

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comp(34244..35422)
DNA (1179bp) protein (393aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_22
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(35419..36630)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CJ8_METBF
hypothetical protein
Cell surface protein {ECO:0000313|EMBL:AKB12971.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_104_23
unknown

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comp(36630..37034)
DNA (405bp) protein (135aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_24
R_NC10_66_22, NC10, Bacteria

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comp(37072..37995)
DNA (924bp) protein (308aa)
secF; protein-export membrane protein secF Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Protein translocase subunit SecF id=4478674 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
secF; protein-export membrane protein secF
08E140C01_z5_2013_Ig3399_v2_scaffold_104_25
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(38009..39346)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000366DE44
protein translocase subunit; K03072 preprotein translocase subunit SecD Tax=CG_Elusi_03
protein translocase subunit SecD ; K03072 preprotein translocase subunit SecD
08E140C01_z5_2013_Ig3399_v2_scaffold_104_26
Heliobacillus mobilis, Heliobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39380..40327)
DNA (948bp) protein (316aa)
Transketolase C-terminal section {ECO:0000313|EMBL:ABH04837.1}; EC=2.2.1.1 {ECO:0000313|EMBL:ABH04837.1};; TaxID=28064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacillus.;" source="Heliobacillus mobilis.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K00615 transketolase [EC:2.2.1.1]
Transketolase C-terminal section n=1 Tax=Heliobacillus mobilis RepID=Q0PII0_HELMO
08E140C01_z5_2013_Ig3399_v2_scaffold_104_27
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40318..42105)
DNA (1788bp) protein (596aa)
Transketolase, N-terminal section {ECO:0000313|EMBL:CDF57702.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CDF57702.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase, N-terminal section n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RND8_9CLOT
08E140C01_z5_2013_Ig3399_v2_scaffold_104_28
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(42300..44804)
DNA (2505bp) protein (835aa)
nucleotidyltransferase Tax=RIFOXYA2_FULL_RIF01_40_8_curated
Nucleotidyl transferase id=4834345 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
nucleotidyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_104_29
unknown

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comp(44983..45438)
DNA (456bp) protein (152aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_104_30
unknown

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comp(45435..45905)
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying items 1-30 of 429 in total

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