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08E140C01_z5_2013_Ig3399_v2_scaffold_1063

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_1
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..765
DNA (765bp) protein (255aa)
Peptidase M14, carboxypeptidase A id=2576696 bin=GWF2_Bacteroidetes_33_16 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
peptidase M14 carboxypeptidase A Tax=GWE2_Bacteroidetes_32_14_curated
peptidase M14 carboxypeptidase A
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_2
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

786..3230
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXZ7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ELR73650.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
extracellular metal-dependent peptidase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_3
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

3250..4182
DNA (933bp) protein (311aa)
RNAse Z id=1772697 bin=GWE2_Bacteroidetes_40_15 species=Pseudoalteromonas atlantica genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
beta-lactamase-like protein
Tax=BJP_IG2102_Bacteroidetes_40_12
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_4
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4280..4981)
DNA (702bp) protein (234aa)
TonB-dependent receptor n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AB417
tonb-dependent receptor plug Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
Outer membrane receptor proteins, mostly Fe transport
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_5
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5757..8876
DNA (3120bp) protein (1040aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FW15_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:AKD03402.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SusC/RagA family TonB-linked outer membrane protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8888..10378
DNA (1491bp) protein (497aa)
RagB/SusD domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6X9_PALPW rbh
ragb/susd domain protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ADQ80473.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_7
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(10570..11022)
DNA (453bp) protein (151aa)
hypothetical protein Tax=CG_Bacteroid_01
Uncharacterized protein id=3664390 bin=GWA2_Bacteroidetes_33_15 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11115..11660
DNA (546bp) protein (182aa)
Uncharacterized protein id=3962927 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_9
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11788..14301
DNA (2514bp) protein (838aa)
Ferrous iron transport protein B id=3981842 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
ferrous iron transport protein b; K04759 ferrous iron transport protein B Tax=GWA2_Bacteroidetes_31_9_curated
ferrous iron transport protein b; K04759 ferrous iron transport protein B
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_10
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14549..14926
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003703D3C
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
multi-sensor hybrid histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_11
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

14985..15332
DNA (348bp) protein (116aa)
PAS domain S-box id=3962930 bin=GWF2_Bacteroidetes_41_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_12
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists


comp(15337..16359)
DNA (1023bp) protein (341aa)
Protein RecA n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNW0_SOLCM
protein RecA
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_13
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16371..16814)
DNA (444bp) protein (148aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin {ECO:0000313|EMBL:AEF54885.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEF54885.1};; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181).;"
thiol peroxidase n=1 Tax=Flexithrix dorotheae RepID=UPI000366AAF7
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_14
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16887..17588)
DNA (702bp) protein (234aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
endonuclease III n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CC1C rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_15
unknown

Not on your lists

comp(17623..17838)
DNA (216bp) protein (72aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1063_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17919..18509)
DNA (591bp) protein (197aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=3084081 bin=GWF2_Bacteroidetes_43_11 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
DNA-directed RNA polymerase, sigma-70 region 2, ECF-type subfamily
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

18727..21543
DNA (2817bp) protein (939aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=CG_Bacteroid_01
Excision endonuclease subunit UvrA id=3915294 bin=GWF2_Bacteroidetes_41_31 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
excinuclease ABC subunit A rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_18

Not on your lists

21579..22073
DNA (495bp) protein (165aa)
Marine sediment metagenome DNA, contig: S12H4_S00523 {ECO:0000313|EMBL:GAI81458.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YbaK/proline--tRNA ligase associated domain protein id=2859358 bin=GWF2_Bacteroidetes_35_48 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
prolyl-tRNA synthetase
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_19
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22138..23355
DNA (1218bp) protein (406aa)
membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] Tax=GWF2_Bacteroidetes_38_335_curated
membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19]
Membrane dipeptidase id=4523615 bin=GWF2_Bacteroidetes_38_335 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

23506..25665
DNA (2160bp) protein (720aa)
Putative adenylate/guanylate cyclase id=1738738 bin=GWE2_Bacteroidetes_42_24 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
ATPase
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

25687..26271
DNA (585bp) protein (195aa)
Metal dependent phosphohydrolase id=3665225 bin=GWF2_Bacteroidetes_43_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
metal-dependent phosphohydrolase HD sub domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26356..27159
DNA (804bp) protein (268aa)
UspA domain-containing protein id=2073880 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
UspA domain-containing protein Tax=GWF2_Bacteroidetes_43_11_curated
UspA domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_23
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

27236..29293
DNA (2058bp) protein (686aa)
NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase id=3915306 bin=GWF2_Bacteroidetes_41_31 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_24
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(29327..30049)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003697570
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_25
Flavobacteria bacterium MS024-2A, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30073..31104)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BH59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEG42412.1}; Flags: Precursor;; TaxID=487796 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain MS024-2A).;"
putative sensor of ECF-type sigma factor
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(31117..31662)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWT5_9PORP
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_27
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31675..32511)
DNA (837bp) protein (279aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=3581741 bin=GWC2_Bacteroidetes_40_22 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Bacteroidetes_42_15_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32537..33280
DNA (744bp) protein (248aa)
Isoprenylcysteine carboxyl methyltransferase id=2771367 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Isoprenylcysteine carboxyl methyltransferase Tax=GWF2_Bacteroidetes_41_31_curated
Isoprenylcysteine carboxyl methyltransferase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

33336..34193
DNA (858bp) protein (286aa)
hypothetical protein id=7201575 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1063_30
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

34190..35326
DNA (1137bp) protein (379aa)
Saccharopine dehydrogenase id=4001061 bin=GWF2_Bacteroidetes_38_335 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
putative L-lysine 6-dehydrogenase rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 1-30 of 42 in total

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