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08E140C01_z5_2013_Ig3399_v2_scaffold_1071

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_1
unknown

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comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1071_2
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(112..534)
DNA (423bp) protein (141aa)
C_GCAxxG_C_C family protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JQA9_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:EQB24573.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Putative redox-active protein (C_GCAxxG_C_C)
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_3
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(537..1727)
DNA (1191bp) protein (397aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] rbh
Phosphoglycerate kinase id=1794140 bin=GWE2_Bacteroidetes_42_24 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

1810..2967
DNA (1158bp) protein (386aa)
class I and II aminotransferase; K14287 methionine aminotransferase [EC:2.6.1.-]
Aminotransferase ybdL id=3541606 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_5
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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2955..3746
DNA (792bp) protein (264aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=3541603 bin=GWF2_Bacteroidetes_41_31 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K08590 carbon-nitrogen hydrolase family protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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4081..5421
DNA (1341bp) protein (447aa)
TRK system potassium uptake protein TrkA id=4498296 bin=GWF2_Bacteroidetes_41_31 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
trkA; TRK system potassium uptake protein TrkA; K03499 trk system potassium uptake protein TrkA rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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5472..5873
DNA (402bp) protein (134aa)
Cation transport family protein id=1953934 bin=GWE2_Bacteroidetes_42_39 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
cation transporter; K03498 trk system potassium uptake protein TrkH Tax=GWE2_Bacteroidetes_42_39_curated
cation transporter; K03498 trk system potassium uptake protein TrkH
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_8
unknown

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6504..6854
DNA (351bp) protein (117aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1071_9
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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7199..7591
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=1770998 bin=GWD2_Bacteroidetes_33_33 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_10
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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7620..8180
DNA (561bp) protein (187aa)
Uncharacterized protein id=1894867 bin=GWE2_Bacteroidetes_32_14 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_11
unknown

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comp(8339..8428)
DNA (90bp) protein (30aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1071_12
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8450..10174)
DNA (1725bp) protein (575aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVD0_SOLCM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS07569.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
ATPase component of various ABC-type transport systems with duplicated ATPase domain rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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10504..11193
DNA (690bp) protein (230aa)
Putative amidophosphoribosyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMS1_SOLCM
putative amidophosphoribosyltransferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
putative amidophosphoribosyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11190..13823)
DNA (2634bp) protein (878aa)
Putative uncharacterized protein id=4497984 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_15
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

13946..14872
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein RibF id=4497982 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
riboflavin kinase/FMN adenylyltransferase rbh
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_16
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14880..15500
DNA (621bp) protein (207aa)
ribonuclease h-related protein; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKU3_9BACT
Ribonuclease {ECO:0000313|EMBL:EAY28909.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_17
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(15583..16491)
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=4497986 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16727..18454)
DNA (1728bp) protein (576aa)
Peptidase U34 dipeptidase id=4497981 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
peptidase U34 Tax=GWF2_Bacteroidetes_41_31_curated
peptidase U34
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_19
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18540..20474)
DNA (1935bp) protein (645aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
sulfate adenylyltransferase large subunit; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
sulfate adenylyltransferase large subunit id=2178424 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_20
Prosthecochloris aestuarii, Prosthecochloris, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(20592..20945)
DNA (354bp) protein (118aa)
S23 ribosomal protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S3Z5_PROA2
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:ACF46787.1}; TaxID=290512 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain DSM 271 / SK 413).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_21
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21041..21949)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] rbh
sulfate adenylyltransferase subunit 2 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AD833 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_22
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(22325..22834)
DNA (510bp) protein (170aa)
NGN domain-containing protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A66FB
NusG antitermination factor Tax=CG_Bacteroid_01
NGN domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_23
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23079..23750
DNA (672bp) protein (224aa)
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=GWE2_Bacteroidetes_32_14_curated
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
inorganic pyrophosphatase id=3230707 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(23896..25230)
DNA (1335bp) protein (445aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4086505 bin=GWF2_Bacteroidetes_38_335 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
(Dimethylallyl)adenosine tRNA methylthiotransferase miaB
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25427..27751
DNA (2325bp) protein (775aa)
DNA topoisomerase i (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I Tax=GWF2_Bacteroidetes_41_31_curated
DNA topoisomerase id=4498000 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_26
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

27853..29028
DNA (1176bp) protein (392aa)
arginase family hydrolase Tax=CG_Bacteroid_01
Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase id=4225241 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
arginase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(29182..29736)
DNA (555bp) protein (185aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC id=4498004 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
crossover junction endodeoxyribonuclease RuvC Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_28
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(29793..30476)
DNA (684bp) protein (228aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=CG_Bacteroid_01
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S3V9_9PORP
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_29
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30525..31574)
DNA (1050bp) protein (350aa)
queA; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWF2_Bacteroidetes_43_11_curated
queA; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=2032313 bin=GWE2_Bacteroidetes_42_24 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1071_30
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(31674..32402)
DNA (729bp) protein (243aa)
truB; tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CAL67982.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
tRNA pseudouridine synthase B n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M5T7_GRAFK
Displaying 30 items

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