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08E140C01_z5_2013_Ig3399_v2_scaffold_1075

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_1
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

74..3301
DNA (3228bp) protein (1076aa)
Periplasmic protease; K08676 tricorn protease [EC:3.4.21.-]
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O10 RepID=UPI000381E4D7 rbh
Peptidase S41 {ECO:0000313|EMBL:EHO42123.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_2
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3706..4293
DNA (588bp) protein (196aa)
ycei family protein id=2143852 bin=GWE2_Bacteroidetes_32_14 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
ycei family protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4362..5588
DNA (1227bp) protein (409aa)
hypothetical protein AtheD1_09182 id=4318944 bin=GWF2_Bacteroidetes_42_66 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_4
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5644..6249
DNA (606bp) protein (202aa)
ycei family protein Tax=GWA2_Bacteroidetes_31_9b_curated
Secreted protein id=2157349 bin=GWD2_Bacteroidetes_33_33 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_5
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6270..6692
DNA (423bp) protein (141aa)
Rrf2 family transcriptional regulator n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B5709
transcriptional regulator, badm/rrf2 family Tax=RBG_13_Bacteroidetes_46_8_curated
transcriptional regulator, badm/rrf2 family
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_6
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6851..8923)
DNA (2073bp) protein (691aa)
Elongation factor G id=4581906 bin=GWF2_Bacteroidetes_49_14 species=uncultured bacterium Rlip1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
fusA; elongation factor G; K02355 elongation factor G Tax=GWF2_Bacteroidetes_49_14_curated
translation elongation factor G; K02355 elongation factor G
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9187..12303)
DNA (3117bp) protein (1039aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELP6_RUNSL rbh
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEI49452.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
glycosyl hydrolase BNR repeat-containing protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_8
Flavobacteria bacterium BBFL7, Flavobacteriia, Bacteroidetes, Bacteria

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12808..13656
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26GD3_FLABB
Uncharacterized protein {ECO:0000313|EMBL:EAS20933.1}; TaxID=156586 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain BBFL7).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_9
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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comp(13772..14500)
DNA (729bp) protein (243aa)
Methyltransferase type 11 id=1915775 bin=GWE2_Spirochaete_31_10 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
methylase Tax=GWE2_Spirochaetes_31_10_curated
type 11 methyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_10
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14527..15162)
DNA (636bp) protein (212aa)
NADPH-dependent FMN reductase n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BHU5_CHLPD rbh
NADPH-dependent FMN reductase rbh
Tax=BJP_IG2069_Syntrophobacterales_47_18
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15435..17084)
DNA (1650bp) protein (550aa)
Amidase {ECO:0000313|EMBL:CCH54788.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CCH54788.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
amidase; K01426 amidase [EC:3.5.1.4] rbh
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DFE4A1 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_12
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17134..17964)
DNA (831bp) protein (277aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4475136 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
type 11 methyltransferase Tax=GWA2_Bacteroidetes_32_17_curated
type 11 methyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17991..18839)
DNA (849bp) protein (283aa)
Calcineurin-like phosphoesterase id=1922423 bin=GWB2_Bacteroidetes_32_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
calcineurin-like phosphoesterase
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_14
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18840..19700)
DNA (861bp) protein (287aa)
DNA polymerase beta domain protein region id=2017573 bin=GWD2_Bacteroidetes_33_33 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
DNA polymerase beta domain-containing protein Tax=GWD2_Bacteroidetes_33_33_curated
phosphoenolpyruvate synthase
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_15
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(19926..21395)
DNA (1470bp) protein (490aa)
amidohydrolase id=24446087 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
amidohydrolase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
amidohydrolase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_16
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21520..21966
DNA (447bp) protein (149aa)
Putative translation initiation inhibitor id=4228342 bin=GWF2_Bacteroidetes_49_14 species=Pyrococcus sp. ST04 genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
translation initiation inhibitor Tax=GWF2_Bacteroidetes_49_14_curated
HRSP12; heat-responsive protein 12
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_17
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21963..22892)
DNA (930bp) protein (310aa)
D-isomer-specific 2-hydroxyacid dehydrogenase (EC:1.1.1.-); K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81] rbh
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003758CAF rbh
Dehydrogenase {ECO:0000313|EMBL:AKD04985.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_18
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22903..23880)
DNA (978bp) protein (326aa)
D-cysteine desulfhydrase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15] Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
D-cysteine desulfhydrase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036540A6 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_19
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24026..26116)
DNA (2091bp) protein (697aa)
Phosphate acetyltransferase {ECO:0000256|PIRNR:PIRNR006107}; EC=2.3.1.8 {ECO:0000256|PIRNR:PIRNR006107};; Phosphotransacetylase {ECO:0000256|PIRNR:PIRNR006107}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
Phosphate acetyltransferase n=2 Tax=Lyngbya aestuarii BL J RepID=U7QAA8_9CYAN rbh
pta; phosphate acetyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_20
unknown

Not on your lists

comp(26246..26398)
DNA (153bp) protein (51aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1075_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26458..28182)
DNA (1725bp) protein (575aa)
Gliding-associated putative ABC transporter substrate-binding component GldG id=4573504 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
gliding-associated ABC transporter substrate-binding protein GldG Tax=GWF2_Bacteroidetes_41_31_curated
gliding-associated ABC transporter substrate-binding protein GldG
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28176..28907)
DNA (732bp) protein (244aa)
Gliding motility-associated ABC transporter permease protein GldF id=2602132 bin=GWF2_Bacteroidetes_43_11 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
gliding motility-associated ABC transporter permease GldF Tax=GWF2_Bacteroidetes_43_11_curated
gliding motility-associated ABC transporter permease GldF
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(29000..29776)
DNA (777bp) protein (259aa)
Putative uncharacterized protein id=1738639 bin=GWE2_Bacteroidetes_42_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein; K09134 hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_24
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29889..30842
DNA (954bp) protein (318aa)
PhoH family protein id=1738642 bin=GWE2_Bacteroidetes_42_24 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=GWF2_Bacteroidetes_43_11_curated
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

30850..31797
DNA (948bp) protein (316aa)
Phosphoribosylaminoimidazole-succinocarboxamides ynthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=1818038 bin=GWE2_Bacteroidetes_32_14 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1075_26
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(32058..32870)
DNA (813bp) protein (271aa)
replicative DNA helicase Tax=CG_Bacteroid_01
Replicative DNA helicase id=4121331 bin=GWF2_Bacteroidetes_41_31 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
replicative DNA helicase
Displaying 26 items

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