ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1297

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_1
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1544)
DNA (1542bp) protein (514aa)
Putative uncharacterized protein id=2277505 bin=GWB2_Bacteroidetes_32_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1652..2545)
DNA (894bp) protein (298aa)
hypothetical protein AtheD1_15627 id=3843047 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2753..3436
DNA (684bp) protein (228aa)
Channel protein, hemolysin III family id=1744944 bin=GWB2_Bacteroidetes_32_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hlyIII; hemolysin III family channel protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_4
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3487..4533)
DNA (1047bp) protein (349aa)
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
Putative uncharacterized protein id=1999565 bin=GWE2_Bacteroidetes_40_63 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_5
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4691..6868)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZT4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM81402.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
penicilin amidase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_6
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7293..8048)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI0003751AF9
Uncharacterized protein {ECO:0000313|EMBL:KJF44479.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8164..10959
DNA (2796bp) protein (932aa)
Gll0760 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NMK5_GLOVI rbh
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_8
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11116..12396)
DNA (1281bp) protein (427aa)
Putative TIM-barrel fold metal-dependent hydrolase id=2915975 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
TIM-barrel fold metal-dependent hydrolase Tax=GWF2_Bacteroidetes_40_14_curated
amidohydrolase family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_9
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12562..13533)
DNA (972bp) protein (324aa)
id=4249902 bin=GWF2_Bacteroidetes_40_14 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
id=4249902 Tax=GWF2_Bacteroidetes_40_14_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_10
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13562..14758)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G024_MICAE
Ca2+-binding protein, RTX toxin Tax=RBG_13_Bacteroidetes_42_15_curated
hemolysin-type calcium-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_11
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14852..16054)
DNA (1203bp) protein (401aa)
Putative Ig id=1895012 bin=GWE2_Bacteroidetes_32_14 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
WD40 domain-containing protein beta Propeller
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_12
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16376..17503)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein id=4249903 bin=GWF2_Bacteroidetes_40_14 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_13
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(17570..18187)
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=1848642 bin=GWE2_Bacteroidetes_40_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Tax=BJP_IG2102_Bacteroidetes_40_12
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_14
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(18198..18680)
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=1848640 bin=GWE2_Bacteroidetes_40_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
putative RNA polymerase ECF-type sigma factor
Tax=BJP_08E140C01_Bacteroidetes_41_49
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18793..19440)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1Q6L8_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EKN41834.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_16
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19474..20112)
DNA (639bp) protein (213aa)
Uncharacterized protein id=4249905 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
Uncharacterized protein Tax=GWF2_Bacteroidetes_40_14_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_17
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20205..20708)
DNA (504bp) protein (168aa)
Putative Ig id=4329312 bin=GWF2_Bacteroidetes_33_16 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
Ca2+-binding protein, RTX toxin
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20793..21842)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWZ4_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75105.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_19
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21867..22685)
DNA (819bp) protein (273aa)
hypothetical protein PcitN1_18526 id=3199860 bin=GWF2_Bacteroidetes_33_16 species=Pseudoalteromonas citrea genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_20
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22738..23799)
DNA (1062bp) protein (354aa)
Beta-lactamase id=2164722 bin=GWE2_Bacteroidetes_32_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
penicillin-binding protein, beta-lactamase class C Tax=GWE2_Bacteroidetes_32_14_curated
penicillin-binding protein, beta-lactamase class C
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23942..24373)
DNA (432bp) protein (144aa)
id=4372047 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=4372047 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_22
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24459..25934)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein id=1894935 bin=GWE2_Bacteroidetes_32_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
cell surface glycoprotein (s-layer protein) related protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_23
unknown

Not on your lists

26116..26223
DNA (108bp) protein (36aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1297_24
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(26220..27152)
DNA (933bp) protein (311aa)
oxidoreductase, zinc-binding dehydrogenase family Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
Oxidoreductase, zinc-binding dehydrogenase family id=1848646 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
oxidoreductase, zinc-binding dehydrogenase family
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_25
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(27162..27836)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T449_PALPW rbh
hypothetical protein rbh
Tax=BJP_IG2102_Bacteroidetes_40_12
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(27883..28881)
DNA (999bp) protein (333aa)
alcohol dehydrogenase Tax=RBG_16_Euryarchaeota_41_19_curated
NADPH:quinone reductase id=1848637 bin=GWE2_Bacteroidetes_40_15 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
alcohol dehydrogenase
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_27
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28928..29296)
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Capnocytophaga RepID=L1NQQ6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPE01446.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_28
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29449..31884)
DNA (2436bp) protein (812aa)
TonB-dependent receptor Tax=GWE2_Bacteroidetes_32_14_curated
TonB-dependent receptor id=4329300 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
TonB-dependent receptor
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_29
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(32052..32771)
DNA (720bp) protein (240aa)
Two-component system, LytT family, response regulator LytT id=1848649 bin=GWE2_Bacteroidetes_40_15 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
LytTR family two component transcriptional regulator
Tax=BJP_08E140C01_Bacteroidetes_41_49
08E140C01_z5_2013_Ig3399_v2_scaffold_1297_30
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32777..33841)
DNA (1065bp) protein (355aa)
Two-component system, LytT family, sensor kinase id=2294256 bin=GWA2_Bacteroidetes_33_15 species=Pseudoalteromonas luteoviolacea genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
signal transduction ATPase Tax=GWD2_Bacteroidetes_33_33_curated
signal transduction histidine kinase LytS
Displaying items 1-30 of 38 in total

View Taxonomy