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08E140C01_z5_2013_Ig3399_v2_scaffold_1411

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_1
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..951)
DNA (951bp) protein (317aa)
L-serine ammonia-lyase (EC:4.3.1.17); K01752 L-serine dehydratase [EC:4.3.1.17] Tax=GWE2_Bacteroidetes_32_14_curated
L-serine ammonia-lyase id=3979287 bin=GWF2_Bacteroidetes_33_16 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1012..2085)
DNA (1074bp) protein (358aa)
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=GWF2_Bacteroidetes_38_335_curated
carbamoyL-phosphate synthase large subunit (EC:6.3.4.16); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase, small subunit id=3846093 bin=GWF2_Bacteroidetes_38_335 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2269..3609)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein id=3842893 bin=GWF2_Bacteroidetes_41_31 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_4
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4262..4912
DNA (651bp) protein (217aa)
TonB-denpendent receptor n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CA85
TonB-dependent receptor {ECO:0000313|EMBL:GAO31187.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
putative outer membrane protein probably involved in nutrient binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_5
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5054..6733)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036BC684 rbh
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=GWB2_Bacteroidetes_41_8_curated
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6917..8176
DNA (1260bp) protein (420aa)
amaB; N-carbamoyl-L-amino acid hydrolase AmaB (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
UPI0003D6151B related cluster n=1 Tax=unknown RepID=UPI0003D6151B rbh
allantoate amidohydrolase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8337..8798)
DNA (462bp) protein (154aa)
Uncharacterized conserved protein n=1 Tax=uncultured Planctomycetales bacterium HF0500_40D21 RepID=E0XYL1_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_8
unknown

Not on your lists

9015..9869
DNA (855bp) protein (285aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1411_9
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9947..11317)
DNA (1371bp) protein (457aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
hypothetical protein MsalJ2_13113 id=1856073 bin=GWD2_Bacteroidetes_33_33 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_10
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(11310..11870)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family id=4083361 bin=GWF2_Bacteroidetes_40_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
sigma-70 family RNA polymerase sigma factor
Tax=BJP_IG2102_Bacteroidetes_40_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_11
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11984..13228)
DNA (1245bp) protein (415aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF44919.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
lvivd repeat-containing protein id=3622159 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_12
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13243..13842)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:AHW61565.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
id=3622162 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13977..15764
DNA (1788bp) protein (596aa)
arginyL-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWF2_Bacteroidetes_41_31_curated
arginyL-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase id=4115810 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_14
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(15903..19157)
DNA (3255bp) protein (1085aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037334EA rbh
periplasmic protease rbh
Tax=BJP_IG2102_Bacteroidetes_40_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_15
unknown

Not on your lists

comp(19734..19955)
DNA (222bp) protein (74aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1411_16
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19948..20565)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD03225.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20558..21091)
DNA (534bp) protein (178aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024V5_SOLUE
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83471.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_18
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21122..21982)
DNA (861bp) protein (287aa)
Alpha/beta hydrolase fold protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TNJ7_MARTH
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADR20454.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22078..24429)
DNA (2352bp) protein (784aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=GWF2_Bacteroidetes_41_31_curated
PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like id=4121540 bin=GWF2_Bacteroidetes_41_31 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_20
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24466..24897)
DNA (432bp) protein (144aa)
Response regulator receiver protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZVU5_METMM
Chemotaxis protein CheY {ECO:0000313|EMBL:AHW58953.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
response regulator receiver protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1411_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24878..25933)
DNA (1056bp) protein (352aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WT78_GEOS8
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
integral membrane sensor signal transduction histidine kinase
Displaying 21 items

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