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08E140C01_z5_2013_Ig3399_v2_scaffold_1556

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_1
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1287)
DNA (1287bp) protein (429aa)
Type I restriction-modification system methyltransferase subunit id=1774528 bin=GWE2_Gammaproteobacteria_37_16 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
type I restriction-modification system methyltransferase subunit Tax=GWE2_Gammaproteobacteria_37_16_curated
type I restriction-modification system methyltransferase subunit
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_2
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1457..2314)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029B4A84
Uncharacterized protein {ECO:0000313|EMBL:EKE84252.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_3
unknown

Not on your lists

comp(2307..2498)
DNA (192bp) protein (64aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1556_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2729..4246)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036184C6
thioredoxin family protein Tax=GWF2_Bacteroidetes_33_38_curated
thioredoxin family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_5
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4464..5699)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KH15_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDF78090.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_6
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(5863..7140)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XKY9_9BACT
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_7
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(7298..8557)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein id=1848629 bin=GWE2_Bacteroidetes_40_15 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_8
unknown

Not on your lists

comp(8864..9082)
DNA (219bp) protein (73aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1556_9
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9629..10246)
DNA (618bp) protein (206aa)
Antirestriction protein ArdA n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KY31_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB54553.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
putative anti-restriction protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_10
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10316..10777)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000375BA99
DNA repair protein {ECO:0000313|EMBL:AKD05450.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
DNA repair protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_11
unknown

Not on your lists

comp(11240..11404)
DNA (165bp) protein (55aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1556_12
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12553..15738)
DNA (3186bp) protein (1062aa)
DNA primase {ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|SAAS:SAAS00051045};; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
dnaG_1; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Bacteroides sp. CAG:598 RepID=R5C4Q6_9BACE
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_13
unknown

Not on your lists

comp(15814..16038)
DNA (225bp) protein (75aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1556_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16294..16683
DNA (390bp) protein (130aa)
Helix-turn-helix n=3 Tax=Bacteroides RepID=D6D7R2_9BACE
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK66057.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_15
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

17417..19561
DNA (2145bp) protein (715aa)
PAS sensor protein id=1838414 bin=GWE2_Bacteroidetes_40_15 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
PAS sensor protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_16
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

20114..20413
DNA (300bp) protein (100aa)
ArsR family transcriptional regulator n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C0A3
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20466..20702
DNA (237bp) protein (79aa)
Redox-active disulfide protein 2 id=1891414 bin=GWE2_Bacteroidetes_42_39 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
redox-active disulfide protein 2
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_18
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20713..21114
DNA (402bp) protein (134aa)
hypothetical protein AtheD1_11157 id=1891416 bin=GWE2_Bacteroidetes_42_39 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21117..21815
DNA (699bp) protein (233aa)
cytochrome c biogenesis protein transmembrane region id=1891418 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21888..23231
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=2618828 bin=GWA2_Bacteroidetes_42_15 species=Parabacteroides distasonis genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
permease Tax=GWE2_Bacteroidetes_42_39_curated
permease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_21
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23215..23583
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family id=1856253 bin=GWD2_Bacteroidetes_33_33 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Putative ArsR-like transcriptional regulator Tax=GWD2_Bacteroidetes_33_33_curated
ArsR family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1556_22
unknown

Not on your lists

23693..23896
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 22 items

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