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08E140C01_z5_2013_Ig3399_v2_scaffold_1593

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_1
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
Signal recognition particle receptor FtsY n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D032_9BACE
signal recognition particle-docking protein FtsY
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(483..632)
DNA (150bp) protein (50aa)
Uncharacterized protein id=1899713 bin=GWE2_Bacteroidetes_42_24 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_3
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(641..829)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 id=3494943 bin=GWF2_Bacteroidetes_41_31 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
ribosomal protein l33; K02913 large subunit ribosomal protein L33
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_4
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(919..2004)
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Pedobacter arcticus RepID=UPI00030D592F rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2037..4172)
DNA (2136bp) protein (712aa)
Putative uncharacterized protein id=2037107 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_6
unknown

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4229..4426
DNA (198bp) protein (66aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1593_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4481..6781)
DNA (2301bp) protein (767aa)
Patatin id=1774810 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
patatin; K07001 NTE family protein Tax=GWF2_Bacteroidetes_43_11_curated
patatin; K07001 NTE family protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6883..8100)
DNA (1218bp) protein (406aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein id=4121521 bin=GWF2_Bacteroidetes_41_31 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_9
CG_Pacearch_02, Pacearchaeota, Archaea

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8180..8749
DNA (570bp) protein (190aa)
DNA-3-methyladenine glycosylase i (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=CG_Pacearch_02
Glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I (3-methyladenine-DNA glycosylase I) (TAG I) (DNA-3-methyladenine glycosidase I) id=4366206 bin=GWF2_Bacteroidetes_41_31 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_10
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(8802..9305)
DNA (504bp) protein (168aa)
Rbr7: putative rubrerythrin id=4121491 bin=GWF2_Bacteroidetes_41_31 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
rbr7; rubrerythrin
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_11
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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9539..10966
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSB8_9BACT
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_12
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11122..11814
DNA (693bp) protein (231aa)
Nucleotidyltransferase {ECO:0000313|EMBL:AHW58493.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
Nucleotidyl transferase id=4213963 bin=GWF2_Bacteroidetes_42_66 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
nucleotidyl transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_13
CG_Bacteroid_01, Bacteroidetes, Bacteria

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11830..14715
DNA (2886bp) protein (962aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DS48_9FLAO
hypothetical protein Tax=CG_Bacteroid_01
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_14
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

14847..16886
DNA (2040bp) protein (680aa)
Histidine kinase id=4121483 bin=GWF2_Bacteroidetes_41_31 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
histidine kinase
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_15
unknown

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16855..16968
DNA (114bp) protein (38aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1593_16
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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16925..21262
DNA (4338bp) protein (1446aa)
GAF sensor hybrid histidine kinase id=4121481 bin=GWF2_Bacteroidetes_41_31 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
GAF sensor hybrid histidine kinase rbh
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21262..22122
DNA (861bp) protein (287aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=GWF2_Bacteroidetes_41_31_curated
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
MCP methyltransferase, CheR-type id=4121478 bin=GWF2_Bacteroidetes_41_31 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_18
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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22136..22714
DNA (579bp) protein (193aa)
Protein-glutamate methylesterase CheB {ECO:0000313|EMBL:EQA72560.1}; EC=3.1.1.61 {ECO:0000313|EMBL:EQA72560.1};; TaxID=1001595 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii serovar Panama str. CZ214.;"
protein-glutamate methylesterase; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
Protein-glutamate methylesterase CheB n=2 Tax=Leptospira RepID=M6VC79_LEPIR
08E140C01_z5_2013_Ig3399_v2_scaffold_1593_19
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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22761..23219
DNA (459bp) protein (153aa)
Alpha/beta hydrolase fold id=3221501 bin=GWF2_Bacteroidetes_43_11 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
alpha/beta hydrolase fold protein Tax=GWF2_Bacteroidetes_43_11_curated
alpha/beta hydrolase fold protein
Displaying 19 items

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