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08E140C01_z5_2013_Ig3399_v2_scaffold_2020

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_1
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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246..1532
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370FF24 rbh
peptidase M20 rbh
Peptidase M20 {ECO:0000313|EMBL:AFK02227.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_2
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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1651..3921
DNA (2271bp) protein (757aa)
Putative uncharacterized protein id=4497697 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Two component regulator propeller
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_3
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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3935..4660
DNA (726bp) protein (242aa)
DNA repair protein RecO id=1953350 bin=GWE2_Bacteroidetes_32_14 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=GWE2_Bacteroidetes_32_14_curated
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4777..5451)
DNA (675bp) protein (225aa)
Octanoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=GWE2_Bacteroidetes_40_63_curated
Octanoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
lipoate-protein ligase B n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299FB5B
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_5
unknown

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comp(5462..5695)
DNA (234bp) protein (78aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2020_6
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5692..6552)
DNA (861bp) protein (287aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=GWE2_Bacteroidetes_32_14_curated
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] rbh
Lipoyl synthase id=3825787 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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6739..8499
DNA (1761bp) protein (587aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=GWF2_Bacteroidetes_43_11_curated
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] rbh
Lysine--tRNA ligase id=4225174 bin=GWF2_Bacteroidetes_43_11 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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8910..9863
DNA (954bp) protein (318aa)
Tetratricopeptide TPR_2 repeat protein id=4497695 bin=GWF2_Bacteroidetes_41_31 species=Desulfovibrio piezophilus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_9
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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10134..10526
DNA (393bp) protein (131aa)
Two-component hybrid sensor and regulator id=3859298 bin=GWF2_Bacteroidetes_43_11 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
two-component hybrid sensor and regulator Tax=GWF2_Bacteroidetes_43_11_curated
sensory box histidine kinase/response regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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10617..10808
DNA (192bp) protein (64aa)
Sec-independent protein translocase protein TatA id=1840197 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA Tax=GWE2_Bacteroidetes_42_39_curated
twin-arginine translocation protein, tata/e family subunit; K03116 sec-independent protein translocase protein TatA
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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11074..12750
DNA (1677bp) protein (559aa)
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=GWF2_Bacteroidetes_41_31_curated
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] rbh
Lytic transglycosylase catalytic id=4497827 bin=GWF2_Bacteroidetes_41_31 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_12
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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12785..13792
DNA (1008bp) protein (336aa)
Putative uncharacterized protein id=4497826 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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13921..16083
DNA (2163bp) protein (721aa)
Putative histidine kinase id=3642765 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
putative signal transduction histidine kinase Tax=GWF2_Bacteroidetes_41_31_curated
signal transduction histidine kinase LytS
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_14
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16158..16772
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000375DC97
Two-component transcriptional regulator, LuxR family {ECO:0000313|EMBL:KGL58512.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
response regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_15
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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17361..20495
DNA (3135bp) protein (1045aa)
TonB-dependent receptor plug Tax=GWA2_Bacteroidetes_40_15_curated
TonB-dependent receptor plug id=4868178 bin=GWA2_Bacteroidetes_A19_40_15 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes rbh
TonB-dependent receptor plug rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2020_16
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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20518..20712
DNA (195bp) protein (65aa)
RagB/SusD domain-containing protein id=4868180 bin=GWA2_Bacteroidetes_A19_40_15 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein Tax=GWA2_Bacteroidetes_40_15_curated
RagB/SusD domain-containing protein
Displaying 16 items

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