ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2856

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_1
unknown

Not on your lists

comp(184..735)
DNA (552bp) protein (184aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2856_2
unknown

Not on your lists

comp(1232..1798)
DNA (567bp) protein (189aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2856_3
unknown

Not on your lists

1849..2115
DNA (267bp) protein (89aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2856_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2413..3015)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1T2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06066.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2960..3619)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DIP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFC57585.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_6
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3942..5096)
DNA (1155bp) protein (385aa)
Cytidyltransferase {ECO:0000313|EMBL:KGL58706.1}; EC=2.7.7.2 {ECO:0000313|EMBL:KGL58706.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
FMN adenylyltransferase, type 3 archaeal n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KQG5_9FLAO rbh
cytidyltransferase-like protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_7
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5144..6442)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000308AE6F rbh
Major facilitator transporter {ECO:0000313|EMBL:KJF43556.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6466..6894)
DNA (429bp) protein (143aa)
rbsd or fucu transport; K02431 L-fucose mutarotase [EC:5.1.3.-]
RbsD or FucU transport n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6S2_PALPW
RbsD or FucU transport {ECO:0000313|EMBL:ADQ80416.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_9
unknown

Not on your lists

comp(7136..7252)
DNA (117bp) protein (39aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2856_10
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7291..10533)
DNA (3243bp) protein (1081aa)
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7X9C5_9BACT rbh
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins {ECO:0000313|EMBL:EMS31554.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
periplasmic protease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_11
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10731..11612)
DNA (882bp) protein (294aa)
Transcriptional regulator, MerR family n=1 Tax=Formosa sp. AK20 RepID=M7NCV6_9FLAO
regulatory protein MerR
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EMQ96308.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

11784..12998
DNA (1215bp) protein (405aa)
Predicted protein id=1878014 bin=GWE2_CPR3_35_7 species=Musa acuminata genus=Musa taxon_order=Zingiberales taxon_class=Liliopsida phylum=Streptophyta tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_13

Not on your lists

13009..13344
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHC2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD43853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pyrimidine dimer DNA glycosylase
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_14
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

13380..15752
DNA (2373bp) protein (791aa)
TonB-dependent receptor plug Tax=CG_Bacteroid_01
TonB-dependent receptor plug id=1959619 bin=GWE2_Bacteroidetes_29_8 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good rbh
TonB-dependent receptor plug
08E140C01_z5_2013_Ig3399_v2_scaffold_2856_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15965..17476
DNA (1512bp) protein (504aa)
Tetratricopeptide repeat protein,histidine kinase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YWD6_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJS05286.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
tetratricopeptide repeat protein,histidine kinase
Displaying 15 items

View Taxonomy