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08E140C01_z5_2013_Ig3399_v2_scaffold_788

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_788_1
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..524
DNA (522bp) protein (174aa)
Signal recognition particle receptor FtsY n=5 Tax=Riemerella anatipestifer RepID=E4TAL4_RIEAD
Signal recognition particle GTPase
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_788_2
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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528..1835
DNA (1308bp) protein (436aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=867902 species="Bacteria; Bac
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZX08_ORNRL
ribosomal protein S12 methylthiotransferase RimO
08E140C01_z5_2013_Ig3399_v2_scaffold_788_3
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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1848..2342
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000369A922
phenylacetic acid degradation-related protein Tax=GWD2_Bacteroidetes_33_33_curated
phenylacetic acid degradation-related protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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2396..4057
DNA (1662bp) protein (554aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 id=2034921 bin=GWE2_Bacteroidetes_29_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good rbh
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_5
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

4155..4571
DNA (417bp) protein (139aa)
osmc family protein id=3843046 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
OsmC family protein; K07397 putative redox protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_6
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4577..5209)
DNA (633bp) protein (211aa)
NUDIX hydrolase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMV0_RUNSL
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEI51600.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_788_7
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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5300..5572
DNA (273bp) protein (91aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BS21_9FLAO
hypothetical protein; K06891 ATP-dependent Clp protease adaptor protein ClpS
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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5583..6050
DNA (468bp) protein (156aa)
hypothetical protein AtheD1_13895 id=1892506 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_9
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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6060..7070
DNA (1011bp) protein (337aa)
UPF0365 protein HMPREF9450_02134 id=4414759 bin=GWF2_Bacteroidetes_43_11 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_10
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

7156..9327
DNA (2172bp) protein (724aa)
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
rela/spot family protein id=4121315 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9324..10205)
DNA (882bp) protein (294aa)
Glycosyl transferase family 2 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y209_9SPHI rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EHQ25712.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
family 2 glycosyl transferase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_788_12

Not on your lists

comp(10244..10993)
DNA (750bp) protein (250aa)
SAM-dependent methyltransferase n=1 Tax=uncultured bacterium RepID=K2E6D5_9BACT
Methyltransferase, FkbM family protein {ECO:0000313|EMBL:AIE96618.1}; TaxID=1455944 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_82_B05.;"
methyltransferase FkbM family
08E140C01_z5_2013_Ig3399_v2_scaffold_788_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11069..11671)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN84_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09804.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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11853..12752
DNA (900bp) protein (300aa)
Glycosyl transferase, family 2 id=2998223 bin=GWF2_Bacteroidetes_43_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
glycosyl transferase family 2 Tax=GWF2_Bacteroidetes_43_11_curated
family 2 glycosyl transferase; K07011
08E140C01_z5_2013_Ig3399_v2_scaffold_788_15
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

12820..13755
DNA (936bp) protein (312aa)
Glycosyl transferase, family 2 id=3109294 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
family 2 glycosyl transferase; K07011
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_16
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

13843..15012
DNA (1170bp) protein (390aa)
Glycosyl transferase id=3109298 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
glycosyl transferase family protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_17
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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15009..16175
DNA (1167bp) protein (389aa)
Glycosyltransferase, GT2 family {ECO:0000313|EMBL:KGL59770.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGL59770.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000373DC54 rbh
glycosyl transferase family protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_788_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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16195..17346
DNA (1152bp) protein (384aa)
glycosyl transferase group 1 (EC:2.4.1.-)
Glycosyl transferase group 1 id=3109288 bin=GWF2_Bacteroidetes_41_31 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
group 1 glycosyl transferase Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_788_19
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17372..18589
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003781706
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIA96526.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
group 1 glycosyl transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_788_20
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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18589..19788
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 id=2190339 bin=GWE2_Bacteroidetes_42_24 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
group 1 glycosyl transferase
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_21
CG_Bacteroid_02, Bacteroidetes, Bacteria

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19794..20408
DNA (615bp) protein (205aa)
acetyltransferase Tax=CG_Bacteroid_02
Acetyltransferase id=3109284 bin=GWF2_Bacteroidetes_41_31 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
acetyltransferase (isoleucine patch superfamily)-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_22
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

20416..21222
DNA (807bp) protein (269aa)
Methyltransferase, FkbM family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS96_9BACT
SAM-dependent methyltransferase
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_23
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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21233..22429
DNA (1197bp) protein (399aa)
Glycosyl transferase family 2 id=3109154 bin=GWF2_Bacteroidetes_41_31 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
family 2 glycosyl transferase
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_24
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

22614..24311
DNA (1698bp) protein (566aa)
Uncharacterized protein id=3109144 bin=GWF2_Bacteroidetes_41_31 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_25
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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24436..25245
DNA (810bp) protein (270aa)
Putative methyltransferase id=2998243 bin=GWF2_Bacteroidetes_43_11 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
putative methyltransferase Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_788_26
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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25252..27756
DNA (2505bp) protein (835aa)
Two-component hybrid sensor and regulator id=2998244 bin=GWF2_Bacteroidetes_43_11 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
two-component hybrid sensor and regulator Tax=GWF2_Bacteroidetes_43_11_curated
NarL family signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_788_27
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27768..29006
DNA (1239bp) protein (413aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Two-component hybrid sensor and regulator id=2170223 bin=GWE2_Bacteroidetes_42_24 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
two-component hybrid sensor and regulator Tax=GWF2_Bacteroidetes_43_11_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_788_28
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(29072..30538)
DNA (1467bp) protein (489aa)
O-antigen polymerase id=3109302 bin=GWF2_Bacteroidetes_41_31 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
O-antigen polymerase
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_29
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(30573..32012)
DNA (1440bp) protein (480aa)
Polysaccharide biosynthesis protein id=3109304 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
polysaccharide biosynthesis protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_788_30
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(32023..34875)
DNA (2853bp) protein (951aa)
Putative uncharacterized protein id=3109306 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
Displaying items 1-30 of 37 in total

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