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08E140C01_z5_2013_Ig3399_v2_scaffold_1013

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_1
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
Transposase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IQG1_DESMD
transposase
Transposase {ECO:0000313|EMBL:AFQ44107.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_2
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(410..1048)
DNA (639bp) protein (213aa)
Nitroreductase n=5 Tax=Pelosinus fermentans RepID=I8RDP3_9FIRM
nitroreductase Tax=RIFOXYC2_FULL_RIF01_39_67_curated
nitroreductase
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1266..2114
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS20542.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_4
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2280..4523
DNA (2244bp) protein (748aa)
1,4-alpha-glucan branching enzyme n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KKY1_9FIRM rbh
1,4-alpha-glucan branching enzyme rbh
1,4-alpha-glucan branching enzyme {ECO:0000313|EMBL:AGL01180.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_5
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4567..6495
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNH5_9FIRM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGL01181.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_6
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6485..8290)
DNA (1806bp) protein (602aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHQ4_9FIRM rbh
malto-oligosyltrehalose trehalohydrolase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_7
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8376..9614
DNA (1239bp) protein (413aa)
Glycosyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDB7_9FIRM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGL01183.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_8
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9794..11422)
DNA (1629bp) protein (543aa)
Cl-channel, voltage-gated family protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J8P4_DESRM rbh
Cl-channel voltage-gated family protein rbh
Cl-channel, voltage-gated family protein {ECO:0000313|EMBL:ABO51447.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11633..12973
DNA (1341bp) protein (447aa)
Trk system potassium uptake protein TrkA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LM45_THEPS rbh
Potassium transporter TrkA {ECO:0000313|EMBL:KJS22557.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
trkA; Trk system potassium uptake protein TrkA rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12989..14434
DNA (1446bp) protein (482aa)
Trk system potassium uptake protein TrkH n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LYP1_THEPS rbh
Potassium transporter {ECO:0000313|EMBL:KJS22558.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
trkH; Trk system potassium uptake protein TrkH rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14609..15493
DNA (885bp) protein (295aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
protein IspE; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Brevibacillus RepID=J3BCB0_9BACL
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_12
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15495..16208
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=1 Tax=Desulfurispora thermophila RepID=UPI00037862C5
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABB16185.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_13
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16245..17006
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TVG4_9FIRM
MobA-like NTP transferase domain containing protein {ECO:0000313|EMBL:AJQ25871.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_14
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17187..18002
DNA (816bp) protein (272aa)
Pur operon repressor n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K6W9_HALHC rbh
pur operon repressor rbh
Pur operon repressor {ECO:0000313|EMBL:AGB40114.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_15
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18132..18386
DNA (255bp) protein (85aa)
Putative septation protein SpoVG n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W7E3_DESOD
hypothetical protein; K06412 stage V sporulation protein G
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_16
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18561..19937
DNA (1377bp) protein (459aa)
UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] rbh
Bifunctional protein GlmU n=1 Tax=Thermincola potens (strain JR) RepID=D5X924_THEPJ rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_17
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19972..20916
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermincola potens (strain JR) RepID=D5X925_THEPJ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_18
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20968..21549
DNA (582bp) protein (194aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Peptidyl-tRNA hydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5X9J4_THEPJ
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_19
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21660..23261
DNA (1602bp) protein (534aa)
Diguanylate cyclase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSR9_9CLOT
PAS/PAC sensor-containing diguanylate cyclase Tax=RBG_16_Gamma2_60_9_curated
PAS/PAC sensor-containing diguanylate cyclase
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_20
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

23472..24185
DNA (714bp) protein (238aa)
Zn-dependent hydrolase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D208_METSW
Zn-dependent hydrolase
Zn-dependent hydrolase {ECO:0000313|EMBL:AEG17297.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_21
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

24356..24817
DNA (462bp) protein (154aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3I6_METSW
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIS31082.1}; Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:CEA13393.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_22
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24849..25259
DNA (411bp) protein (137aa)
UPI0003D1BA76 related cluster n=1 Tax=unknown RepID=UPI0003D1BA76
Uncharacterized protein {ECO:0000313|EMBL:KJS13610.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_23
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(25349..26263)
DNA (915bp) protein (305aa)
id=3793053 bin=GWC2_Clostridiales_40_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
id=3793053 Tax=GWC2_Clostridiales_40_7_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_24
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26430..26906
DNA (477bp) protein (159aa)
YbaK/aminoacyl-tRNA ligase-associated domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1E2_CLOA9
YbaK/aminoacyl-tRNA ligase-associated domain-containing protein
YbaK/aminoacyl-tRNA ligase-associated domain-containing protein {ECO:0000313|EMBL:AFS79314.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_25
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26957..27646
DNA (690bp) protein (230aa)
racD; aspartate racemase (EC:5.1.1.13); K01779 aspartate racemase [EC:5.1.1.13] rbh
Aspartate racemase family protein n=1 Tax=Paenibacillus alvei TS-15 RepID=S9SEV6_PAEAL rbh
Aspartate racemase family protein {ECO:0000313|EMBL:EPY04417.1}; TaxID=1117108 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei TS-15.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_26
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27669..28232)
DNA (564bp) protein (188aa)
Nitroreductase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPA8_9FIRM
Nitroreductase {ECO:0000313|EMBL:EAX48214.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
nitroreductase
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_27
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

28375..28980
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BAE9_9BACL
Pentapeptide repeat-containing protein Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
Pentapeptide repeat-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_28
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

29080..29790
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Brachyspira hyodysenteriae RepID=UPI0003666F34
RES domain-containing protein
RES domain protein {ECO:0000313|EMBL:ADG71975.1}; TaxID=526224 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150); (Serpulina murdochii).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_29
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29868..30785)
DNA (918bp) protein (306aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D806CF rbh
methyltransferase, putative, TIGR00027 family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1013_30
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31079..31828
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CTL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93839.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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