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08E140C01_z5_2013_Ig3399_v2_scaffold_1259

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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445..1941
DNA (1497bp) protein (499aa)
Transporter n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H700_ILYPC rbh
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family rbh
Tax=BJP_IG2103_Clostridiales_50_15
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_2
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2104..5178)
DNA (3075bp) protein (1025aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZC1_DESOH
NifA subfamily transcriptional regulator
Tax=BJP_08E140C01_Syntrophobacterales_43_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_3
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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5421..6764
DNA (1344bp) protein (448aa)
Short chain fatty acid transporter n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H733_ILYPC
short chain fatty acid transporter
Short chain fatty acid transporter {ECO:0000313|EMBL:ADO81929.1}; Flags: Precursor;; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_4
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6964..8262
DNA (1299bp) protein (433aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CL63_SYNLT
Acetyl-CoA hydrolase/transferase Tax=S_Thermoanaerobacterales_50_218
acetyl-CoA hydrolase/transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_5
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8304..9596
DNA (1293bp) protein (431aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADI02832.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ADI02832.1};; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
Acetyl-CoA acetyltransferase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIV4_SYNLT rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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9652..10056
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP31_9FIRM
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KJS18963.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
glyoxalase/bleomycin resistance protein/dioxygenase
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_7
unknown

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10313..10681
DNA (369bp) protein (123aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1259_8
unknown

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10786..10977
DNA (192bp) protein (64aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1259_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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11425..12345
DNA (921bp) protein (307aa)
rpc:RPC_2002 hypothetical protein id=1242183 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_10
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12451..13824
DNA (1374bp) protein (458aa)
Short chain fatty acid transporter n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DLF1_HALPG
Uncharacterized protein {ECO:0000313|EMBL:KJS33658.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
short chain fatty acid transporter; K02106 short-chain fatty acids transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_11
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13901..14095
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Dehalobacter RepID=K4L548_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV06407.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_12
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14395..14922
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Paenibacillus polymyxa (strain SC2) RepID=E3EJN2_PAEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO59403.1}; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_13
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15002..16480
DNA (1479bp) protein (493aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D206_9FIRM rbh
carboxylesterase type B rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_14
unknown

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comp(16483..16608)
DNA (126bp) protein (42aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1259_15
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16703..17275)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XU02_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ88960.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
Protein of unknown function (DUF3231)
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_16
unknown

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17509..17610
DNA (102bp) protein (34aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1259_17
unknown

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comp(17596..17940)
DNA (345bp) protein (115aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1259_18
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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18117..18662
DNA (546bp) protein (182aa)
LemA family protein; K03744 LemA protein id=24520669 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
LemA family protein; K03744 LemA protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
LemA family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_19
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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18681..19592
DNA (912bp) protein (304aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Zixibacteria_43_9_curated
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-]
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI000364D8EA
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_20
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19637..22303
DNA (2667bp) protein (889aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1); K08282 non-specific serine/threonine protein kinase [EC:2.7.11.1]
Helicase SNF2 {ECO:0000313|EMBL:KGP74876.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
SNF2-related protein id=4577120 bin=GWC2_Clostridiales_40_7 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_21
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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22375..23112
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=4119907 bin=GWC2_Clostridiales_40_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
zinc finger, SWIM-type Tax=GWC2_Clostridiales_40_7_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23115..23624)
DNA (510bp) protein (170aa)
Alpha/beta hydrolase fold protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0G2_9CLOT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EHI99023.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carboxylesterase
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_23
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23633..23869)
DNA (237bp) protein (79aa)
ybfK; carboxylesterase YbfK (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Clostridium intestinale URNW RepID=U2N4F0_9CLOT
Ndr family protein {ECO:0000313|EMBL:KEQ26848.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_24
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23887..24804)
DNA (918bp) protein (306aa)
PadR family transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D4E8 rbh
putative transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:AET67781.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24955..26862
DNA (1908bp) protein (636aa)
Chaperone protein HtpG n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQZ7_CLOC7 rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Heat shock protein Hsp90-like; K04079 molecular chaperone HtpG rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1259_26
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26973..28346
DNA (1374bp) protein (458aa)
YidE/YbjL duplication n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLS8_ALKOO rbh
YidE/YbjL duplication; K07085 putative transport protein rbh
YidE/YbjL duplication {ECO:0000313|EMBL:ABW17995.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
Displaying 26 items

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