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08E140C01_z5_2013_Ig3399_v2_scaffold_1278

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_1
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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87..698
DNA (612bp) protein (204aa)
Putative methyltransferase n=2 Tax=Thermoanaerobacter RepID=B0K1X5_THEPX
Methyltransferase {ECO:0000313|EMBL:AIS52573.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
putative methyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_2
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

701..1156
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AC92_DESDJ
Uncharacterized protein {ECO:0000313|EMBL:KJS18953.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_3
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1437..2519
DNA (1083bp) protein (361aa)
oorA; 2-oxoacid:ferredoxin oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] rbh
2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TB24_HELMI rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_4
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2541..3302
DNA (762bp) protein (254aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] rbh
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X8X3_THEPJ rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_5
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3295..3861
DNA (567bp) protein (189aa)
Putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AG17_CARHZ
keto/oxoacid ferredoxin oxidoreductase subunit gamma
Putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:ABB14407.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_6
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3882..4154
DNA (273bp) protein (91aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CII5_SYNLT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADI00850.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_7
unknown

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comp(4475..4882)
DNA (408bp) protein (136aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1278_8
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5054..6091
DNA (1038bp) protein (346aa)
Stage V sporulation protein K n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E101_9FIRM rbh
Stage V sporulation protein K {ECO:0000313|EMBL:CCO09344.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
AAA+ family ATPase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_9
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6193..8001
DNA (1809bp) protein (603aa)
GTPase HflX n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMU1_9FIRM rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
GTP-binding protein HflX rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7998..9275
DNA (1278bp) protein (426aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS22387.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Aluminum resistance family protein id=2021272 bin=GWB2_Clostridiales_37_7 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
cystathionine beta-lyase family protein involved in aluminum resistance
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_11
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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9368..9760
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W2G2_DESAS
hypothetical protein; K09793 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG82353.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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9842..10936
DNA (1095bp) protein (365aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1YUK9_9CLOT rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11025..11636)
DNA (612bp) protein (204aa)
LexA family transcriptional repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Thermincola potens (strain JR) RepID=D5XFD3_THEPJ
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_14
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11800..12096
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF08968.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
peptidoglycan-binding LysM
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_15
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12224..13063
DNA (840bp) protein (280aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SYG0_SYNGF
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADY57072.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_16
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13323..14162
DNA (840bp) protein (280aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SYG0_SYNGF
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADY57072.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_17
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14204..15043
DNA (840bp) protein (280aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SYG0_SYNGF
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADY57072.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_18
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15619..17013)
DNA (1395bp) protein (465aa)
aspartokinase; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WE44_DESOD rbh
Aspartokinase {ECO:0000313|EMBL:AET69442.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_19
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17085..17750)
DNA (666bp) protein (222aa)
phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:ACL69882.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ACL69882.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
Phosphoserine phosphatase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX63_HALOH
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18198..18761
DNA (564bp) protein (188aa)
Transposase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSG1_CLOCD
transposase
Transposase {ECO:0000313|EMBL:AEV68265.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_21
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19141..19530)
DNA (390bp) protein (130aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W927_DESOD
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AET68236.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19685..20827)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVL4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EEQ62167.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein; K09788 hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_23
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(21009..22958)
DNA (1950bp) protein (650aa)
Putative bacteriochlorophyll 4-vinyl reductase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XYR4_9FIRM
Putative bacteriochlorophyll 4-vinyl reductase {ECO:0000313|EMBL:CDD11367.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
TRAP transporter, 4TM/12TM fusion protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_24
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(23033..24043)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003761D5B
TRAP transporter solute receptor protein {ECO:0000313|EMBL:KKB38272.1}; TaxID=1221996 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
hypothetical protein; K07080
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24316..25698)
DNA (1383bp) protein (461aa)
MmgE/PrpD family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVL7_9FIRM rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:EEQ62170.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
propionate catabolism protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_26
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(26069..26935)
DNA (867bp) protein (289aa)
Putative carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVL3_9FIRM
2,3-dimethylmalate lyase Tax=RBG_13_Deltaproteobacteria_51_10_curated
carboxyvinyl-carboxyphosphonate phosphorylmutase
08E140C01_z5_2013_Ig3399_v2_scaffold_1278_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27143..28234
DNA (1092bp) protein (364aa)
PAS domain S-box protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVL5_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EEQ62168.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
proprionate catabolism activator, Fis family; K02688 transcriptional regulator, propionate catabolism operon regulatory protein
Displaying 27 items

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