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08E140C01_z5_2013_Ig3399_v2_scaffold_1689

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_1
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8..367)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS86_TEPAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI40305.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_2
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(369..1391)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS85_TEPAE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCP24838.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_3
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1403..1783)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=U4Q7T5_TEPAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI40304.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_4
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1948..2442)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAU8_THETN
Uncharacterized protein {ECO:0000313|EMBL:AIS51395.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_5
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2442..3275)
DNA (834bp) protein (278aa)
Polyferredoxin n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAU7_THETN rbh
Polyferredoxin NapH {ECO:0000313|EMBL:AIS51396.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
NapH; polyferredoxin rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_6
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3342..3911)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWM2_CLOSD
Uncharacterized protein {ECO:0000313|EMBL:KDR93950.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_7
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4168..5109)
DNA (942bp) protein (314aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AFV05132.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AFV05132.1};; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
UDP-glucose 4-epimerase n=1 Tax=Dehalobacter sp. CF RepID=K4L1H2_9FIRM rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_8
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5174..6160)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDF58800.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDF58800.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
UDP-glucose 4-epimerase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RU40_9CLOT rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_9
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(6273..6509)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BD9D
redox-active disulfide protein 2 Tax=GWC2_Clostridiales_40_7_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_10
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(6530..7084)
DNA (555bp) protein (185aa)
thioredoxin id=3617358 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
thioredoxin; K03671 thioredoxin 1 Tax=GWC2_Clostridiales_40_7_curated
thioredoxin domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_11
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7103..8107)
DNA (1005bp) protein (335aa)
Putative permease n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IVN3_DESMD
permease
Putative permease {ECO:0000313|EMBL:AFQ44219.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_12
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8147..8440)
DNA (294bp) protein (98aa)
Transcriptional regulator, ArsR family id=2926586 bin=GWF2_Clostridiales_38_85 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Tax=BJP_IG2103_Clostridiales_50_15
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_13
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8529..8975)
DNA (447bp) protein (149aa)
Fur family transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EBA4
Fur family transcriptional regulator {ECO:0000313|EMBL:KJS47038.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
Fe2+/Zn2+ uptake regulation protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_14
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8947..9804)
DNA (858bp) protein (286aa)
Zinc ABC transporter, inner membrane permease protein ZnuB n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0IDM2_9FIRM
Zinc ABC transporter, inner membrane permease protein ZnuB {ECO:0000313|EMBL:EQB22692.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
znuC; zinc ABC transport system permease protein ZnuC; K09816 zinc transport system permease protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(9785..10567)
DNA (783bp) protein (261aa)
znuB; zinc ABC transport system ATP-binding protein ZnuB; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=GWF2_Clostridiales_38_85_curated
znuB; zinc ABC transport system ATP-binding protein ZnuB; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-]
ATPase component of Mn/Zn ABC-type transporter id=4395752 bin=GWF2_Clostridiales_38_85 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_16
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10564..11439)
DNA (876bp) protein (292aa)
Zinc ABC transport system zinc-binding protein ZnuA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDX5_ACEWD
znuA; zinc ABC transport system zinc-binding protein ZnuA; K09815 zinc transport system substrate-binding protein
Zinc ABC transport system zinc-binding protein ZnuA {ECO:0000313|EMBL:AFA48018.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_17
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11621..13435)
DNA (1815bp) protein (605aa)
Sulfatase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T1W7_SYNGF rbh
sulfatase rbh
Sulfatase {ECO:0000313|EMBL:ADY55231.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_18
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13561..14454)
DNA (894bp) protein (298aa)
ABC-type glycine betaine transport, periplasmic subunit n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWV4_9GAMM rbh
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC {ECO:0000313|EMBL:EXJ13484.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
glycine/betaine ABC transporter substrate-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_19
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14474..15316)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X559_DESRD rbh
binding-protein-dependent transport system inner membrane protein; K02001 glycine betaine/proline transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACV69556.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_20
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15317..16504)
DNA (1188bp) protein (396aa)
glycine betaine/L-proline ABC transporter ATPase; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
Glycine betaine/L-proline ABC transporter, ATPase subunit n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5Y0_DESAS
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIH77673.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_21
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16803..17270
DNA (468bp) protein (156aa)
VanZ-like protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NW02_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EEF92615.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
VanZ family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_22
unknown

Not on your lists

comp(17327..17440)
DNA (114bp) protein (38aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1689_23
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17529..19370)
DNA (1842bp) protein (614aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI89_DESK7 rbh
polysaccharide biosynthesis protein CapD rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:AEG15302.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_24
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19400..20053)
DNA (654bp) protein (218aa)
capsular polysaccharide biosynthesis homolog ywqE; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Capsular polysaccharide biosynthesis homolog ywqE n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RBS4_THETN
Phosphoesterase {ECO:0000313|EMBL:EYE89479.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_25
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20050..20745)
DNA (696bp) protein (232aa)
Capsular exopolysaccharide biosynthesis protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IC40_9FIRM
Capsular biosynthesis protein {ECO:0000313|EMBL:AIQ49006.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
capsular exopolysaccharide biosynthesis protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_26
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20746..22044)
DNA (1299bp) protein (433aa)
Lipopolysaccharide biosynthesis n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5B3_DESAP rbh
lipopolysaccharide biosynthesis protein rbh
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ACA60164.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1689_27
unknown

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comp(22041..22328)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 27 items

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