ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1931

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_1
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(365..589)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG76397.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_2
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(627..3302)
DNA (2676bp) protein (892aa)
MCP methyltransferase/methylesterase (EC:2.1.1.80 3.1.1.61); K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] Tax=CG_Anaero_01
MCP methyltransferase/methylesterase CheR/CheB (EC:2.1.1.80 3.1.1.61); K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor id=4214115 bin=GWF2_Lentisphaerae_57_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_3
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3582..4634
DNA (1053bp) protein (351aa)
YheC/D like ATP-grasp protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2DRC0_9BACT rbh
Alpha-L-glutamate ligase {ECO:0000313|EMBL:KGP77106.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4667..5935
DNA (1269bp) protein (423aa)
ATP-grasp fold domain protein, DUF201-type n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGI5_CELLD rbh
ATP-grasp fold domain-containing protein rbh
ATP-grasp fold domain protein, DUF201-type {ECO:0000313|EMBL:ADZ82940.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_5
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6125..6838)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A4H2_NATTJ
hypothetical protein; K01163 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB85149.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_6
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7037..7432
DNA (396bp) protein (132aa)
Rhodanese-related sulfurtransferase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D0T9_DESAJ
Sulfurtransferase {ECO:0000313|EMBL:KJS46666.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
Rhodanese-related sulfurtransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_7
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

7696..8643
DNA (948bp) protein (316aa)
Bile acid:sodium symporter n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DT39_METV3 rbh
Bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:ADI36299.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_8
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8735..9274
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X8A2_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG82822.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_9
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9401..10678)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KFC9_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:AJS57249.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_10
unknown

Not on your lists

comp(10929..11042)
DNA (114bp) protein (38aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1931_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11427..12749
DNA (1323bp) protein (441aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS21742.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Putative uncharacterized protein id=3707109 bin=GWB1_CP_36_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_12
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12916..13551
DNA (636bp) protein (212aa)
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 /; 20
Uracil phosphoribosyltransferase n=2 Tax=Caldicellulosiruptor RepID=E4Q4D0_CALOW
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_13
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13574..14776
DNA (1203bp) protein (401aa)
Uracil-xanthine permease n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WG48_DESOD rbh
uracil-xanthine permease; K02824 uracil permease rbh
Uracil-xanthine permease {ECO:0000313|EMBL:AET70142.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_14
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15230..16399
DNA (1170bp) protein (390aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZB1_9FIRM rbh
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EGW37034.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
integral membrane sensor signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_15
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16371..17033
DNA (663bp) protein (221aa)
Response regulator n=1 Tax=Desulfosporosinus sp. OT RepID=G2FLD4_9FIRM rbh
Response regulator {ECO:0000313|EMBL:EGW41485.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
LuxR family two component transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_16
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17110..17343
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FLD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW41486.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1931_17
unknown

Not on your lists

17481..17657
DNA (177bp) protein (59aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1931_18
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17722..19863
DNA (2142bp) protein (714aa)
Fibronectin type III domain protein (Fragment) id=1899559 bin=GWE2_Bacteroidetes_32_14 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
Displaying 18 items

View Taxonomy