ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1971

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_1
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..445
DNA (444bp) protein (148aa)
Rhomboid family protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHN5_DESK7
Rhomboid domain containing peptidase Tax=S_Thermoanaerobacterales_50_218
rhomboid family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_2
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(588..1499)
DNA (912bp) protein (304aa)
Malate permease n=1 Tax=Caloramator australicus RC3 RepID=I7KTH5_9CLOT
Malate permease {ECO:0000313|EMBL:CCJ33073.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
putative permease
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1511..2176)
DNA (666bp) protein (222aa)
TPR repeat protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CL26_9CLOT
TPR repeat protein {ECO:0000313|EMBL:EOC99410.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_4
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..3183)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XBL1_THEPJ rbh
hypothetical protein; K07139 rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_5
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3176..4123)
DNA (948bp) protein (316aa)
Cysteine synthase A {ECO:0000313|EMBL:AIF52600.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AIF52600.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
cysteine synthase K/M/A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AR56_CHLCH
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_6
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

4318..5523
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74EF0_GEOSL
hypothetical protein; K09133 hypothetical protein Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
hypothetical protein; K09133 hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_7
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5539..6117)
DNA (579bp) protein (193aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
Orotate phosphoribosyltransferase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QA93_CALH1
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_8
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6114..6845)
DNA (732bp) protein (244aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255|HAMAP-Rule:MF_01200};; Short=OMPdecase {ECO:0000255|HAMAP-Rule:MF_01200};; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=PYRF_SYNWW
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_9
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6845..7768)
DNA (924bp) protein (308aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
dihydroorotate dehydrogenase family protein; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase n=1 Tax=Thermincola potens (strain JR) RepID=D5X7V7_THEPJ
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_10
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7765..8547)
DNA (783bp) protein (261aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EEJ7_9FIRM
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02823 dihydroorotate dehydrogenase electron transfer subunit
Tax=BJP_IG2069_Clostridiales_42_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_11
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8587..11784)
DNA (3198bp) protein (1066aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase large chain n=2 Tax=Desulfotomaculum RepID=F6B468_DESCC rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11777..12895)
DNA (1119bp) protein (373aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPJ1_ACEAZ
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_13
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12900..14192)
DNA (1293bp) protein (431aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W0B0_DESAS
Dihydroorotase Tax=S_Thermacetogenium_phaeum_55_64
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_14
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14197..15126)
DNA (930bp) protein (310aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Aspartate carbamoyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKS7_DESK7 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_15
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15577..16422
DNA (846bp) protein (282aa)
DegV family protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A8C2_NATTJ
degV family protein
DegV family protein {ECO:0000313|EMBL:ACB84488.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17628
DNA (1179bp) protein (393aa)
Major facilitator transporter n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYF0_CLOA9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS20420.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
major facilitator superfamily transporter rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_17
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17873..19561
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036982EC rbh
carbon starvation protein CstA; K06200 carbon starvation protein rbh
Carbon starvation protein CstA {ECO:0000313|EMBL:ACL69799.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_18
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19621..21309)
DNA (1689bp) protein (563aa)
uridine kinase; K00876 uridine kinase [EC:2.7.1.48]
Phosphoribulokinase/uridine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRZ0_9FIRM
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:EAX47168.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_19
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21443..21760
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacter RepID=I9AF82_9THEO
Uncharacterized protein {ECO:0000313|EMBL:KHO61998.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_20
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21881..22165
DNA (285bp) protein (95aa)
ArsR family transcriptional regulator n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6E6H4_BACAZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:EKN68886.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
ArsR family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_21
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22167..22814
DNA (648bp) protein (216aa)
Putative integral membrane protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH39_9FIRM
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGL01929.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_22
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22829..23914)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X901_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG81001.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_23
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23999..24964)
DNA (966bp) protein (322aa)
CoA-substrate-specific enzyme activase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0C9_9FIRM rbh
CoA-substrate-specific enzyme activase rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_24
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24961..26055)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QU13_ACEAZ rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1971_25
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26055..26996)
DNA (942bp) protein (314aa)
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LJ36_THEPS rbh
hgdC5; activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC rbh
Tax=BJP_08E140C01_Clostridiales_46_19
Displaying 25 items

View Taxonomy