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08E140C01_z5_2013_Ig3399_v2_scaffold_3055

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_1
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..740)
DNA (738bp) protein (246aa)
Putative glycosyltransferase n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YVN8_LYNSP
Glycosyltransferase {ECO:0000313|EMBL:EXX84797.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
group 1 glycosyl transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_2
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1035..1901
DNA (867bp) protein (289aa)
EDD domain protein, DegV family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EFY7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EYE87548.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
degV family protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_3
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1909..3189)
DNA (1281bp) protein (427aa)
Hydrogenase large subunit domain protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J4G7_DESRM rbh
hydrogenase large subunit rbh
Hydrogenase large subunit domain protein {ECO:0000313|EMBL:ABO49970.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_4
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3622..4950
DNA (1329bp) protein (443aa)
Ammonium transporter n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJN0_DESOD rbh
ammonium transporter; K03320 ammonium transporter, Amt family rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_5
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4974..5312
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=3 Tax=Dehalobacter RepID=K4KR85_9FIRM
Nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFV04602.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_6
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5362..6150)
DNA (789bp) protein (263aa)
ABC transporter related protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X8W1_THEPJ
ABC transporter; K15600 putative hydroxymethylpyrimidine transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADG80961.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_7
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6177..7175)
DNA (999bp) protein (333aa)
Membrane lipoprotein lipid attachment site n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DLY7_DESRL rbh
membrane lipoprotein lipid attachment site; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein rbh
Membrane lipoprotein lipid attachment site {ECO:0000313|EMBL:AEG58430.1}; Flags: Precursor;; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_8
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7239..8003)
DNA (765bp) protein (255aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9F4_DESRM
binding-protein-dependent transport systems inner membrane component; K15599 putative hydroxymethylpyrimidine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABO51707.1}; Flags: Precursor;; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_9
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8000..8308)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I8R0L5_9THEO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIW00968.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_10
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8537..9661)
DNA (1125bp) protein (375aa)
Peptidase T-like protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJL9_ALKMQ rbh
peptidase T-like protein rbh
Peptidase T-like protein {ECO:0000313|EMBL:ABR46387.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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10229..11257
DNA (1029bp) protein (343aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:KJS19730.1}; EC=2.5.1.54 {ECO:0000313|EMBL:KJS19730.1};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0D1_9FIRM
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11247..12086
DNA (840bp) protein (280aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXL3_METFV
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12636..13079)
DNA (444bp) protein (148aa)
CheW protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MU77_9EURY
CheW protein
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_3055_14
unknown

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comp(13180..13314)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 14 items

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