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08E140C01_z5_2013_Ig3399_v2_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_693_1
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..721)
DNA (720bp) protein (240aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:AEF93825.1}; EC=2.7.7.27 {ECO:0000313|EMBL:AEF93825.1};; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B9X7_DESCC
08E140C01_z5_2013_Ig3399_v2_scaffold_693_2
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(782..2029)
DNA (1248bp) protein (416aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B9X6_DESCC
08E140C01_z5_2013_Ig3399_v2_scaffold_693_3
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2044..4509)
DNA (2466bp) protein (822aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] rbh
Phosphorylase n=1 Tax=Thermincola potens (strain JR) RepID=D5XDC6_THEPJ rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_693_4
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4581..6446)
DNA (1866bp) protein (622aa)
1,4-alpha-glucan-branching protein (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] rbh
1,4-alpha-glucan branching enzyme GlgB {ECO:0000255|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000255|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000255|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Short=BE {ECO:0000255|HAMAP-Rule:MF_00685};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GLGB_HALOH rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_5
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6648..7196)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LW06_DESBD
hypothetical protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
08E140C01_z5_2013_Ig3399_v2_scaffold_693_6
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

7393..11367
DNA (3975bp) protein (1325aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) Tax=GWD2_Clostridiales_32_59_curated
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) rbh
Long-chain-fatty-acid--CoA ligase id=1893210 bin=GWD2_Clostridiales_32_59 species=Dehalobacter sp. CF genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_7
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11388..13253
DNA (1866bp) protein (622aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T1K6_SYNGF rbh
integral membrane sensor signal transduction histidine kinase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_8
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13234..14745
DNA (1512bp) protein (504aa)
Response regulators consisting of a CheY-like receiver domain and an HD-GYP domain protein n=3 Tax=Dehalobacter RepID=K4KXL2_9FIRM rbh
Phosphodiesterase {ECO:0000313|EMBL:AHF10980.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
Response regulators consisting of a CheY-like receiver domain and an HD-GYP domain protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_9
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14750..15166)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D574_DESAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM40948.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_10
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15184..15975)
DNA (792bp) protein (264aa)
ABC-type multidrug transport system, permease component id=3193041 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes rbh
multidrug ABC transporter permease; K09694 lipooligosaccharide transport system permease protein
Tax=BJP_IG2069_Clostridiales_42_11
08E140C01_z5_2013_Ig3399_v2_scaffold_693_11
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15962..16936)
DNA (975bp) protein (325aa)
Nod factor export ATP-binding protein I (EC:3.6.3.-); K09695 lipooligosaccharide transport system ATP-binding protein
ABC-type multidrug transport system, ATPase component id=2957825 bin=GWF1_Spirochaetes_51_8 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Tax=BJP_IG2069_Clostridiales_42_11
08E140C01_z5_2013_Ig3399_v2_scaffold_693_12
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

comp(16955..17137)
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=1846029 bin=GWD2_Clostridiales_32_19 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
hypothetical protein Tax=GWD2_Clostridiales_32_19_curated
4Fe-4S binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_693_13
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17261..17434)
DNA (174bp) protein (58aa)
UPF0291 protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SXQ7_SYNGF
hypothetical protein
UPF0291 protein Sgly_1592 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17482..18231)
DNA (750bp) protein (250aa)
Apurinic/apyrimidinic endonuclease {ECO:0000313|EMBL:CCQ95587.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CCQ95587.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
exoA; apurinic/apyrimidinic endonuclease (EC:3.1.11.2)
Apurinic/apyrimidinic endonuclease n=1 Tax=Clostridium ultunense Esp RepID=M1ZKK0_9CLOT
08E140C01_z5_2013_Ig3399_v2_scaffold_693_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18310..19188)
DNA (879bp) protein (293aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUR1_CLOB8 rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AJG98680.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19216..20247)
DNA (1032bp) protein (344aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
agmatine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] rbh
Putative agmatine deiminase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB86_9CLOT rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_17
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20320..21681)
DNA (1362bp) protein (454aa)
histidine kinase n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C75B
integral membrane sensor signal transduction histidine kinase
Tax=BJP_IG2157_Clostridiales_52_13
08E140C01_z5_2013_Ig3399_v2_scaffold_693_18
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21678..22367)
DNA (690bp) protein (230aa)
transcriptional regulator n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C75A
Transcriptional regulator {ECO:0000313|EMBL:EST11539.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
two component transcriptional regulator, winged helix family
08E140C01_z5_2013_Ig3399_v2_scaffold_693_19
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22508..22759)
DNA (252bp) protein (84aa)
Tax=BJP_IG2157_Clostridiales_35_16
08E140C01_z5_2013_Ig3399_v2_scaffold_693_20
unknown

Not on your lists

comp(22773..22955)
DNA (183bp) protein (61aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_693_21
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23060..23947)
DNA (888bp) protein (296aa)
ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1) rbh
ATP-dependent DNA ligase clustered with Ku protein, LigD {ECO:0000313|EMBL:AFV06130.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AFV06130.1};; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
DNA polymerase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000369342B rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_22
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23947..24897)
DNA (951bp) protein (317aa)
ATP-dependent DNA ligase n=3 Tax=Dehalobacter RepID=K4KY60_9FIRM rbh
ATP-dependent DNA ligase rbh
ATP-dependent DNA ligase {ECO:0000313|EMBL:EQB21184.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_23
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24963..25808)
DNA (846bp) protein (282aa)
DNA repair protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00036A6EB2 rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
Ku domain protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_24
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25929..26630
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y1P0_9FIRM
Metal dependent hydrolase {ECO:0000313|EMBL:KJR49058.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_693_25
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26616..27062)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS20555.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_693_26
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27194..28828)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E3M5_CLOK1 rbh
ABC transporter ATPase rbh
Predicted ABC transporter with duplicated ATPase domain {ECO:0000313|EMBL:EDK34341.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_27
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29044..30108)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XKZ2_DESHA rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX02523.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_693_28
unknown

Not on your lists

comp(30246..30392)
DNA (147bp) protein (49aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_693_29
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30337..30543)
DNA (207bp) protein (69aa)
Radical SAM domain protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I700_CLOCE
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL76992.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_693_30
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30550..31989)
DNA (1440bp) protein (480aa)
multidrug MFS transporter n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BD54 rbh
Multidrug MFS transporter {ECO:0000313|EMBL:KGK84248.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
EmrB/QacA family drug resistance transporter rbh
Displaying items 1-30 of 45 in total

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