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Ig7659_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_9_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

Ig7659_scaffold_9_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252..1370
DNA (1119bp) protein (373aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase id=1270116 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1418..2131
DNA (714bp) protein (238aa)
Putative thiol:disulfide interchange protein (Periplasmic) id=1270115 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
thiol:disulfide interchange protein DsbC
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2141..2620
DNA (480bp) protein (160aa)
hypothetical protein id=5080241 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2631..4472
DNA (1842bp) protein (614aa)
peptidase m61 domain protein id=5080242 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidase m61 domain-containing protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4580..5875)
DNA (1296bp) protein (432aa)
paaK; phenylacetate-coenzyme A ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] id=5080243 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
paaK; phenylacetate-coenzyme A ligase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5872..6312)
DNA (441bp) protein (147aa)
paaI; phenylacetic acid degradation protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] id=5080244 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
paaI; phenylacetic acid degradation protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6312..7118)
DNA (807bp) protein (269aa)
Putative enoyl-CoA hydratase paaG id=1270110 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
enoyl-CoA hydratase/carnithine racemase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7296..8084
DNA (789bp) protein (263aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17] id=5080246 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8235..8642
DNA (408bp) protein (136aa)
twin-arginine translocation pathway signal protein id=5080247 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
twin-arginine translocation pathway signal protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_trna_1
unknown

Not on your lists

8707..8780
DNA (74bp)
transferRNA Met
Ig7659_scaffold_9_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8853..9413
DNA (561bp) protein (187aa)
yaeq family protein id=5080248 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
yaeq family protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_9_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9423..10016)
DNA (594bp) protein (198aa)
Putative uncharacterized protein id=1270105 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10205..10573
DNA (369bp) protein (123aa)
hypothetical protein id=5080251 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10689..12041
DNA (1353bp) protein (451aa)
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=5080252 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12196..13620
DNA (1425bp) protein (475aa)
histidine kinase; K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] id=5080254 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13811..14290
DNA (480bp) protein (160aa)
hypothetical protein id=5080255 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
translation initiation factors
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14287..15720
DNA (1434bp) protein (478aa)
Two sigma54 transcriptional regulator id=1270100 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
response regulator NtrC rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15912..17480
DNA (1569bp) protein (523aa)
mdoG; glucans biosynthesis protein G; K03670 periplasmic glucans biosynthesis protein id=5080257 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mdoG; glucan biosynthesis protein G rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17453..19450
DNA (1998bp) protein (666aa)
B-glucosyltransferase MdoH id=1270098 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
b-glucosyltransferase MdoH rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19489..20142)
DNA (654bp) protein (218aa)
Putative uncharacterized protein id=1270097 bin=GWE1_Burkholderiales_65_30 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
predicted membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig7659_scaffold_9_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20162..21532)
DNA (1371bp) protein (457aa)
Signal recognition particle protein id=1270096 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
signal recognition particle protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21710..22510
DNA (801bp) protein (267aa)
cytochrome c assembly protein id=5080261 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome c assembly protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22654..22893
DNA (240bp) protein (80aa)
hypothetical protein; K06950 uncharacterized protein id=5080262 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig7659_scaffold_9_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22924..24720
DNA (1797bp) protein (599aa)
periplasmic sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] id=5080263 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sensor signal transduction histidine kinase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24740..26203
DNA (1464bp) protein (488aa)
response regulator NtrC; K02667 two-component system, NtrC family, response regulator PilR id=5080264 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator NtrC
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26193..26816
DNA (624bp) protein (208aa)
N-acetylmuramyL-L-alanine amidase, negative regulator of ampc, ampd; K03806 AmpD protein id=5080265 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
N-acetyl-anhydromuranmyl-L-alanine amidase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27253..30144
DNA (2892bp) protein (964aa)
nrdA; ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=5080266 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nrdA; ribonucleoside-diphosphate reductase subunit alpha
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_9_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30288..31454
DNA (1167bp) protein (389aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase subunit beta id=1270089 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_9_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32225..33112)
DNA (888bp) protein (296aa)
Sugar kinase, ribokinase id=1270088 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
PfkB protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 222 in total

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