name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
Ig7659_scaffold_15_1
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..113)
|
Elongation factor Tu n=1 Tax=Alteromonas macleodii (strain Black Sea 11) RepID=K0D8E1_ALTMS
elongation factor Tu
Uncharacterized protein {ECO:0000313|EMBL:AGP99195.1}; TaxID=1300258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii str. 'Ionian Sea UM7'.;"
|
|
Ig7659_scaffold_15_trna_3
unknown
|
Not on your lists |
comp(161..232)
|
transferRNA Thr
|
|
Ig7659_scaffold_15_trna_2
unknown
|
Not on your lists |
comp(298..368)
|
transferRNA Gly
|
|
Ig7659_scaffold_15_trna_1
unknown
|
Not on your lists |
comp(454..536)
|
transferRNA Tyr
|
|
Ig7659_scaffold_15_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(594..1340)
|
Uracil-DNA glycosylase id=1274451 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
uracil-DNA glycosylase
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1351..2151)
|
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
rbh
Indole-3-glycerol phosphate synthase id=1274452 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_4
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2148..2288)
|
id=5082776 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
|
|
Ig7659_scaffold_15_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2297..3364)
|
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] id=5082777 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3380..4030)
|
Threonine efflux protein id=1274455 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
lysine exporter protein LysE/YggA
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4051..5124)
|
ltaE; low-specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=5082779 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
threonine aldolase (EC:4.1.2.5)
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5121..5717)
|
Anthranilate synthase component II id=1274457 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
anthranilate synthase component II
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5723..7222)
|
anthranilate synthase component I (EC:4.1.3.27)
rbh
Anthranilate synthase component I n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGH1_9BURK
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7628..8239
|
Putative lipoprotein transmembrane id=1274459 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
Ig7659_scaffold_15_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8263..8958)
|
phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=5082785 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
phosphoglycolate phosphatase (EC:3.1.3.18)
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_12
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8958..9638)
|
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
rbh
Ribulose-phosphate 3-epimerase id=1274463 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
|
|
Ig7659_scaffold_15_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9727..10137
|
Protein ApaG id=1274464 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
apaG; ApaG protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10190..12415
|
Site-specific recombinase Gcr id=1274465 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
site-specific recombinase gcr
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12412..13422
|
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] id=5082789 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
thiamine monophosphate kinase
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13471..14028
|
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=5082790 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
phosphatidylglycerophosphatase (EC:3.1.3.27)
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14030..14518
|
CinA domain-containing protein id=1274468 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
CinA domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_18
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria
|
Not on your lists |
comp(14507..15481)
|
NAD-dependent epimerase/dehydratase id=12557869 bin=CNBR_ACIDO species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rbh
NAD-dependent epimerase/dehydratase
rbh
Tax=CG_Deferri_01
|
|
Ig7659_scaffold_15_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15554..15985
|
LysR family transcriptional regulator id=5082793 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
LysR family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15996..17138
|
hypothetical protein id=5082794 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
hypothetical protein
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17342..17809
|
id=5082795 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_22
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17941..19653)
|
Preprotein translocase subunit SecA {ECO:0000313|EMBL:EWS63422.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
YecA; K07039 uncharacterized protein id=5082796 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
sec-c motif domain-containing protein
|
|
Ig7659_scaffold_15_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19753..21489)
|
dihydroorotase (EC:3.5.2.3)
rbh
Dihydroorotase {ECO:0000313|EMBL:ABD27523.1}; EC=3.5.2.3 {ECO:0000313|EMBL:ABD27523.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Dihydroorotase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3Q0_NOVAD
rbh
|
|
Ig7659_scaffold_15_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21894..22748)
|
NmrA family protein id=5082799 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
NmrA family protein
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22838..23299
|
HxlR family transcriptional regulator id=5082800 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
HxlR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig7659_scaffold_15_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23427..23672
|
hypothetical protein id=5082801 bin=GWF1_Burkholderiales_GWF1_66_17 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
Ig7659_scaffold_15_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23694..24086)
|
glutaredoxin family protein id=5082802 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glutaredoxin family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|