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Ig7659_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_22_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2151
DNA (2151bp) protein (717aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase id=1303830 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2199..2447
DNA (249bp) protein (83aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=5083610 bin=GWF1_Burkholderiales_GWF1_66_17 species=Novosphingobium aromaticivorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2490..3272)
DNA (783bp) protein (261aa)
Aldose 1-epimerase id=1303832 bin=GWE1_Burkholderiales_65_30 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Aldose 1-epimerase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3327..5216)
DNA (1890bp) protein (630aa)
putative pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] id=5083607 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative pyruvate kinase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5262..6818)
DNA (1557bp) protein (519aa)
Mg chelatase-related protein id=1303835 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Mg chelatase subunit ChlI rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7213..7551
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 id=5083605 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nitrogen regulatory protein P-II
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7576..9009
DNA (1434bp) protein (478aa)
Ammonium transporter id=1303837 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ammonia permease
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9172..9429
DNA (258bp) protein (86aa)
Uncharacterized protein id=1303838 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9505..10635
DNA (1131bp) protein (377aa)
FAD linked oxidase domain-containing protein id=1303839 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glcE; glycolate oxidase FAD-binding subunit
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10734..11963
DNA (1230bp) protein (410aa)
Glycolate oxidase iron-sulfur subunit id=1303840 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glcF; glycolate oxidase iron-sulfur subunit rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12126..12512
DNA (387bp) protein (129aa)
hypothetical protein id=5083600 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
oxidoreductase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12520..12885
DNA (366bp) protein (122aa)
hypothetical protein id=5083599 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..13640
DNA (759bp) protein (253aa)
putative effector of murein hydrolase id=5083598 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13659..14141)
DNA (483bp) protein (161aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9] id=5083597 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Ig7659_scaffold_22_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14314..14580
DNA (267bp) protein (89aa)
response regulator receiver protein id=5083596 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..16235)
DNA (1284bp) protein (428aa)
lysophospholipid transporter LplT id=5083595 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
lysophospholipid transporter LplT rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_17
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16706..17434
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM47_METPP rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_22_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17444..18466
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000380BD59 rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_22_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18680..19810
DNA (1131bp) protein (377aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] id=5083594 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
alanine racemase (EC:5.1.1.1) rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19959..21146
DNA (1188bp) protein (396aa)
secretion protein HlyD id=5083593 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
secretion protein HlyD
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21156..24440
DNA (3285bp) protein (1095aa)
acriflavin resistance protein id=5083592 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acriflavin resistance protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24474..24701
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=1303850 bin=GWE1_Burkholderiales_65_30 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24868..25917
DNA (1050bp) protein (350aa)
C4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family id=5083590 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
C4-dicarboxylate transporter/malic acid transport protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25930..26235
DNA (306bp) protein (102aa)
hypothetical protein id=5083589 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26547..27308
DNA (762bp) protein (254aa)
hypothetical protein; K07090 id=5083588 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
predicted permease
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27423..27818)
DNA (396bp) protein (132aa)
hypothetical protein id=5083586 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
tellurite resistance TerB family protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_22_27
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27848..28528)
DNA (681bp) protein (227aa)
hypothetical protein; K06890 id=5083585 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_22_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28629..29516
DNA (888bp) protein (296aa)
Putative uncharacterized protein id=1303857 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_22_29
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29529..29858)
DNA (330bp) protein (110aa)
hypothetical protein; K09946 hypothetical protein id=5083582 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_22_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30110..30532
DNA (423bp) protein (141aa)
hypothetical protein id=5083581 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 162 in total

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