ggKbase home page

Ig7659_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_94_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
4-hydroxy-4-methyl-2-oxoglutarate aldolase id=1261931 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
4-carboxy-4-hydroxy-2-oxoadipate aldolase rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_94_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..1648)
DNA (1047bp) protein (349aa)
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45) rbh
Amidohydrolase 2 id=1261930 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1807..2715
DNA (909bp) protein (303aa)
LysR family transcriptional regulator id=5079370 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2719..3693)
DNA (975bp) protein (325aa)
auxin efflux carrier; K07088 id=5079369 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
auxin efflux carrier
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3708..4613)
DNA (906bp) protein (302aa)
hypothetical protein id=5079368 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
6-phosphogluconate dehydrogenase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4628..5617)
DNA (990bp) protein (330aa)
TctC id=5079367 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TctC rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5734..7050)
DNA (1317bp) protein (439aa)
TRAP dicarboxylate transporter, permease component id=1261925 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
dctM; TRAP-type C4-dicarboxylate transport system, large permease component
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7053..7574)
DNA (522bp) protein (174aa)
hypothetical protein id=5079365 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7792..8832)
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter, DctP subunit id=1261923 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TRAP transporter solute receptor rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9076..10104)
DNA (1029bp) protein (343aa)
TRAP transporter solute receptor id=5079362 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TRAP transporter solute receptor
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_11
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10256..11119)
DNA (864bp) protein (288aa)
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:EWS64796.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Amidohydrolase 2 id=1261920 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase rbh
Ig7659_scaffold_94_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11235..12026
DNA (792bp) protein (264aa)
enoyl-CoA hydratase (EC:4.2.1.17) id=5079360 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
enoyl-CoA hydratase (EC:4.2.1.17) rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12180..14036
DNA (1857bp) protein (619aa)
feruloyl-CoA synthase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] id=5079359 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
feruloyl-CoA synthase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14050..15300
DNA (1251bp) protein (417aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) rbh
Acetyl-CoA acetyltransferase id=1261917 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15327..16091
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR id=1261916 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16088..16507
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase (EC:3.1.2.23)
4-hydroxybenzoyl-CoA thioesterase id=1261915 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16554..18266
DNA (1713bp) protein (571aa)
Acyl-CoA dehydrogenase-like id=1261912 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
acyl-CoA dehydrogenase-like protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18312..18845
DNA (534bp) protein (178aa)
MarR family transcriptional regulator id=1261911 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
MarR family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_94_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18989..19324
DNA (336bp) protein (112aa)
putative transcriptional regulator id=5079351 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19433..20287)
DNA (855bp) protein (285aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) id=5079350 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20428..20988
DNA (561bp) protein (187aa)
Protein GrpE id=1261908 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
protein grpE
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21108..23045
DNA (1938bp) protein (646aa)
chaperone protein dnak; K04043 molecular chaperone DnaK id=5079348 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
dnaK; molecular chaperone DnaK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_94_23
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23130..24260
DNA (1131bp) protein (377aa)
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ id=5079347 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_94_24
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24416..25093)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DEZ9_9PSED
arsenate reductase
Arsenate reductase {ECO:0000313|EMBL:BAP88357.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Ig7659_scaffold_94_25
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25294..25590)
DNA (297bp) protein (99aa)
Toxin-antitoxin system, toxin component, MazF family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RUQ9_9BURK
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:EFV96042.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
transcriptional modulator of MazE/toxin MazF
Ig7659_scaffold_94_26
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25671..25922)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003637F60
transcriptional regulator/antitoxin MazE
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Ig7659_scaffold_94_27
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

comp(26003..26344)
DNA (342bp) protein (114aa)
CutA1 divalent ion tolerance protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SAK9_9CHLR
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:BAL53195.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
CutA1 divalent ion tolerance protein
Ig7659_scaffold_94_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26341..26784)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63284.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein id=5079346 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Ig7659_scaffold_94_29
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26833..27213
DNA (381bp) protein (127aa)
predicted protein n=1 Tax=Populus trichocarpa RepID=UPI000193E356
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_94_30
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27350..28363
DNA (1014bp) protein (338aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] id=5079345 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
adenosine deaminase (EC:3.5.4.4) rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Displaying items 1-30 of 79 in total

View Taxonomy