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Ig7659_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_219_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..412
DNA (411bp) protein (137aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJJ7_9BACT
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(464..889)
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y84_RHOFD
heat shock protein Hsp20
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1233..1514
DNA (282bp) protein (94aa)
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_4
unknown

Not on your lists

1518..1778
DNA (261bp) protein (87aa)

This feature has no annotations

Ig7659_scaffold_219_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1780..2427
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003696E90
phosphoribosyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2538..3224)
DNA (687bp) protein (229aa)
two component LuxR family transcriptional regulator id=5079297 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two component LuxR family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3224..4714)
DNA (1491bp) protein (497aa)
PAS/PAC sensor signal transduction histidine kinase id=5079296 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
PAS/PAC sensor signal transduction histidine kinase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5042..5617
DNA (576bp) protein (192aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAX8_ACIDE
phosphoribosyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5629..6249
DNA (621bp) protein (207aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAX9_ACIDE rbh
phosphoribosyltransferase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_219_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6581..7429
DNA (849bp) protein (283aa)
Crp/FNR family transcriptional regulator id=5079295 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Crp/FNR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_11
unknown

Not on your lists

7603..7857
DNA (255bp) protein (85aa)

This feature has no annotations

Ig7659_scaffold_219_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7942..8472
DNA (531bp) protein (177aa)
signal transduction protein with CBS domains id=5079294 bin=GWF1_Burkholderiales_GWF1_66_17 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
CBS domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8694..9143
DNA (450bp) protein (150aa)
Putative host attachment protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XKX3_VARPD
putative host attachment protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..9581
DNA (306bp) protein (102aa)
hypothetical protein id=5079293 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9659..11446
DNA (1788bp) protein (596aa)
ABC transporter-like protein id=1274276 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..12946
DNA (1329bp) protein (443aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=5079284 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Glu/Leu/Phe/Val dehydrogenase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12984..13454)
DNA (471bp) protein (157aa)
hypothetical protein id=5079283 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13463..14083)
DNA (621bp) protein (207aa)
NUDIX hydrolase id=1274285 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NUDIX hydrolase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14086..14376)
DNA (291bp) protein (97aa)
Putative transmembrane protein id=1274286 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative transmembrane protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14453..15949)
DNA (1497bp) protein (499aa)
NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] id=5079280 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NADH:ubiquinone oxidoreductase subunit N (EC:1.6.99.5)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_219_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15978..17453)
DNA (1476bp) protein (492aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5) rbh
Proton-translocating NADH-quinone oxidoreductase subunit M id=1274288 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17467..19500)
DNA (2034bp) protein (678aa)
proton-translocating NADH-quinone oxidoreductase subunit l (EC:1.6.99.5) rbh
Proton-translocating NADH-quinone oxidoreductase subunit l id=1274289 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_23
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19526..19834)
DNA (309bp) protein (103aa)
NAD(P)H-quinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=5079277 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
NADH-ubiquinone oxidoreductase subunit 4L
Ig7659_scaffold_219_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19831..20469)
DNA (639bp) protein (213aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] id=5079276 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20491..21027)
DNA (537bp) protein (179aa)
NADH-quinone oxidoreductase subunit I (EC:1.6.99.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=5079275 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nuoI; formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit chain I
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..22125)
DNA (1083bp) protein (361aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H id=1274293 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_219_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22122..24257)
DNA (2136bp) protein (712aa)
NADH dehydrogenase subunit G id=1274294 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit chain G
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_219_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24272..25645)
DNA (1374bp) protein (458aa)
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:EWS65685.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EWS65685.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
NADH-quinone oxidoreductase subunit F id=1274295 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NADH-quinone oxidoreductase subunit F rbh
Ig7659_scaffold_219_29
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..26178)
DNA (537bp) protein (179aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=5079271 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NADH-quinone oxidoreductase subunit 2 {ECO:0000313|EMBL:EWS65686.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EWS65686.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
nuoE; NADH:ubiquinone oxidoreductase 24 kD subunit
Ig7659_scaffold_219_30
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26175..27428)
DNA (1254bp) protein (418aa)
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=5079270 bin=GWF1_Burkholderiales_GWF1_66_17 species=Verminephrobacter aporrectodeae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
nuoD; NADH:ubiquinone oxidoreductase 49 kD subunit 7
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Displaying items 1-30 of 50 in total

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