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Ig7659_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_247_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

Ig7659_scaffold_247_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..1549)
DNA (1254bp) protein (418aa)
citrate transporter id=5080460 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
citrate transporter rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1610..2449)
DNA (840bp) protein (280aa)
hypothetical protein id=5080461 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2620..3018
DNA (399bp) protein (133aa)
glycoside hydrolase family protein id=5080462 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acinetobacter guillouiae genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glycoside hydrolase family protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3094..4083)
DNA (990bp) protein (330aa)
beta-lactamase-like protein id=5080463 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
beta-lactamase-like protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_6
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4194..4838)
DNA (645bp) protein (215aa)
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:EWS63163.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
TetR family transcriptional regulator id=5080464 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TetR family transcriptional regulator rbh
Ig7659_scaffold_247_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4981..5358
DNA (378bp) protein (126aa)
regulator of competence-specific genes-like protein id=5080465 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
regulator of competence-specific genes-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5344..5823)
DNA (480bp) protein (160aa)
hypothetical protein id=5080466 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5940..6983
DNA (1044bp) protein (348aa)
LysR family transcriptional regulator id=5080467 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6987..7904
DNA (918bp) protein (306aa)
hypothetical protein; K15270 S-adenosylmethionine uptake transporter id=5080468 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8080..8718)
DNA (639bp) protein (213aa)
5-formyltetrahydrofolate cyclo-ligase id=5080469 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
5-formyltetrahydrofolate cyclo-ligase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8743..10716
DNA (1974bp) protein (658aa)
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] id=5080470 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
lytic transglycosylase catalytic subunit rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10736..11680
DNA (945bp) protein (315aa)
NAD-dependent epimerase/dehydratase id=1270566 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NAD-dependent epimerase/dehydratase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11766..12344)
DNA (579bp) protein (193aa)
Uncharacterized conserved protein id=1270567 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12565..12891
DNA (327bp) protein (109aa)
Uncharacterized protein id=1270568 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
uncharacterized protein conserved in bacteria
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13101..13808
DNA (708bp) protein (236aa)
Glutathione s-transferase domain protein id=1270569 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glutathione S-transferase domain-containing protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13832..15121
DNA (1290bp) protein (430aa)
Candidate tRNA nucleotidyltransferase (TRNA adenylyltransferase) id=1270570 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
cca; tRNA nucleotidyltransferase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15227..15979
DNA (753bp) protein (251aa)
trehalose-phosphatase (EC:3.1.3.12); K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] id=5080476 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
HAD family hydrolase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15976..17814
DNA (1839bp) protein (613aa)
Glycoside hydrolase 15-like protein id=1270572 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glycoside hydrolase 15-like protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17874..19247
DNA (1374bp) protein (458aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] id=5080478 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15) rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19379..20284
DNA (906bp) protein (302aa)
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel id=5080479 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mechanosensitive ion channel MscS rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20324..21034
DNA (711bp) protein (237aa)
Two component transcriptional regulator, winged helix family id=1270575 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
two component transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_247_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21031..22395
DNA (1365bp) protein (455aa)
periplasmic sensor signal transduction histidine kinase id=5080481 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
periplasmic sensor signal transduction histidine kinase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_24
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22808..23845)
DNA (1038bp) protein (346aa)
transposase IS110 n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037B0C5C rbh
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:BAP87221.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Ig7659_scaffold_247_25
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24174..25250)
DNA (1077bp) protein (359aa)
ABC transporter-like protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWA2_9BURK rbh
Sugar ABC transporter ATPase {ECO:0000313|EMBL:EYC50291.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
ABC transporter-like protein rbh
Ig7659_scaffold_247_26
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25263..26123)
DNA (861bp) protein (287aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWA1_9BURK rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_247_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26286..27164)
DNA (879bp) protein (293aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein id=5080484 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
binding-protein-dependent transport system inner membrane protein
Tax=CG_Rhodof_02
Ig7659_scaffold_247_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27226..28533)
DNA (1308bp) protein (436aa)
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein id=5080485 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
extracellular solute-binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28673..29659)
DNA (987bp) protein (329aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] id=5080486 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glucokinase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_247_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29816..30259)
DNA (444bp) protein (148aa)
Thioredoxin id=1270582 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
thioredoxin
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 41 in total

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