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Ig7659_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_262_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334..1368
DNA (1035bp) protein (345aa)
TrbL/VirB6 plasmid conjugal transfer protein id=1279299 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TrbL/VirB6 plasmid conjugal transfer protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_262_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1396..2091
DNA (696bp) protein (232aa)
type IV secretion system family protein; K03200 type IV secretion system protein VirB5 id=5080963 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
type IV secretion system family protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_262_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2136..2906
DNA (771bp) protein (257aa)
Type IV secretory pathway, VirB8 component n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVK7_9BURK rbh
virB8; type IV secretory pathway, VirB8 component rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_262_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2903..3817
DNA (915bp) protein (305aa)
Type IV secretory pathway, VirB9 component id=1265493 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
virB9; type IV secretory pathway, VirB9 component rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_262_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3814..5151
DNA (1338bp) protein (446aa)
Type IV secretory pathway, VirB10 component n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVK5_9BURK rbh
virB10; type IV secretory pathway, VirB10 component rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_262_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5157..6299
DNA (1143bp) protein (381aa)
Type IV secretory pathway, VirB11 component n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVK4_9BURK rbh
virB11; type IV secretory pathway, VirB11 component rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_262_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6296..8335
DNA (2040bp) protein (680aa)
TRAG family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVK3_9BURK rbh
TRAG family protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_262_8
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8332..8976
DNA (645bp) protein (215aa)
Putative uncharacterized protein id=1275424 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Ig7659_scaffold_262_9
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9015..10112
DNA (1098bp) protein (366aa)
hypothetical protein id=5083620 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Ig7659_scaffold_262_10
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10122..11411
DNA (1290bp) protein (430aa)
Putative uncharacterized protein id=1275422 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Ig7659_scaffold_262_11
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11485..12645
DNA (1161bp) protein (387aa)
Mobile mystery protein B {ECO:0000313|EMBL:EWS65112.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Filamentation induced by cAMP protein Fic id=1275421 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
filamentation induced by cAMP protein fic
Ig7659_scaffold_262_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12845..13918)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KMX2_STEMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH12411.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Ig7659_scaffold_262_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13924..15747)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GFZ7_PSEST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA85663.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
Ig7659_scaffold_262_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15753..16124)
DNA (372bp) protein (124aa)
UPI0003D658DE related cluster n=1 Tax=unknown RepID=UPI0003D658DE
Type I restriction-modification system, specificity subunit S
EcoKI restriction-modification system protein HsdS {ECO:0000313|EMBL:CKI14385.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
Ig7659_scaffold_262_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16335..17360)
DNA (1026bp) protein (342aa)
Restriction endonuclease subunit S n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DDQ0_9PSED rbh
restriction endonuclease S subunit rbh
Restriction endonuclease S subunit {ECO:0000313|EMBL:AGA85664.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
Ig7659_scaffold_262_16
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17357..19066)
DNA (1710bp) protein (570aa)
DNA methyltransferase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B34C30 rbh
Type I restriction-modification system, DNA-methyltransferase subunit M
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig7659_scaffold_262_17
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19083..21881)
DNA (2799bp) protein (933aa)
Type I restriction modification enzyme restriction subunit n=1 Tax=Pseudomonas aeruginosa M18 RepID=G2LBR9_PSEAI rbh
hsdR; type I restriction modification enzyme restriction subunit rbh
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig7659_scaffold_262_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21926..22684)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF5_THIA3 rbh
hypothetical protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
Ig7659_scaffold_262_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23313..25634
DNA (2322bp) protein (774aa)
Protein kinase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z248_METPS
protein kinase
Protein kinase {ECO:0000313|EMBL:BAI62770.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Ig7659_scaffold_262_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25735..26091
DNA (357bp) protein (119aa)
Putative transposase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128D2_POLSJ
putative transposase
Putative transposase {ECO:0000313|EMBL:ABE45110.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Ig7659_scaffold_262_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26096..27256)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase (EC:1.3.99.3) rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5T4_ACIDE rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EER60162.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Ig7659_scaffold_262_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27281..28426)
DNA (1146bp) protein (382aa)
putative Acyl-CoA dehydrogenase (EC:1.3.99.2)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5T3_ACIDE rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EER60161.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Ig7659_scaffold_262_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28423..29406)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5T2_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER60160.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
extra-cytoplasmic solute receptor family protein rbh
Ig7659_scaffold_262_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29432..31540)
DNA (2109bp) protein (703aa)
CoA-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E0788 rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:GAD21164.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
CoA-binding domain-containing protein rbh
Ig7659_scaffold_262_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31537..32331)
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5T0_ACIDE rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EER60158.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
enoyl-CoA hydratase rbh
Ig7659_scaffold_262_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32405..33157
DNA (753bp) protein (251aa)
Transcriptional regulator, IclR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S9_ACIDE rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EER60157.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
IclR family transcriptional regulator
Ig7659_scaffold_262_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33482..34453)
DNA (972bp) protein (324aa)
putative DNA relaxase/nickase, TraS/VirD2-like protein id=5083645 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative DNA relaxase/nickase, TraS/VirD2-like protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_262_28
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34470..35009)
DNA (540bp) protein (180aa)
hypothetical protein id=5083646 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Ig7659_scaffold_262_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35350..36327)
DNA (978bp) protein (326aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family id=5083647 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
parB-like partition protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_262_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36311..37168)
DNA (858bp) protein (286aa)
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein id=5083648 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cobyrinic acid ac-diamide synthase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 33 in total

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