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Ig7659_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_277_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
Auxin efflux carrier id=1311011 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315..2528
DNA (2214bp) protein (738aa)
heme catalase/peroxidase; K03782 catalase-peroxidase [EC:1.11.1.21] id=5083751 bin=GWF1_Burkholderiales_GWF1_66_17 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
heme catalase/peroxidase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_3
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2726..4462
DNA (1737bp) protein (579aa)
ABC transporter n=1 Tax=Thauera phenylacetica B4P RepID=N6ZLZ4_9RHOO rbh
ABC transporter {ECO:0000313|EMBL:ENO95318.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
ABC transporter rbh
Ig7659_scaffold_277_4
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4455..5123
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM17 RepID=J2VQR9_9PSED
Subtilisin-like serine protease {ECO:0000313|EMBL:KEA63918.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
hypothetical protein
Ig7659_scaffold_277_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5120..6460
DNA (1341bp) protein (447aa)
Aromatic-ring hydroxylase protein conaining monooxygenase FAD-binding domain n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4U4_9RHOO rbh
aromatic-ring hydroxylase protein conaining monooxygenase FAD-binding domain rbh
Aromatic-ring hydroxylase protein conaining monooxygenase FAD-binding domain {ECO:0000313|EMBL:BAL27007.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Ig7659_scaffold_277_6
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6584..7555)
DNA (972bp) protein (324aa)
AraC family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YWQ6_9RHOO
eutR; putative ethanolamine operon transcriptional regulator
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig7659_scaffold_277_7
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7790..9382
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJ19_THASP rbh
hypothetical protein rbh
Quinohemoprotein amine dehydrogenase, alpha subunit {ECO:0000313|EMBL:KIN89821.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
Ig7659_scaffold_277_8
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9403..10833
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4V2_AZOSB rbh
qhpX; putative qinohemoprotein amine dehydrogenase rbh
Uncharacterized protein {ECO:0000313|EMBL:CAL93857.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Ig7659_scaffold_277_9
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10835..11155
DNA (321bp) protein (107aa)
Quinohemoprotein amine dehydrogenase subunit gamma n=1 Tax=Thauera sp. 63 RepID=N6YHA2_9RHOO
Quinohemoprotein amine dehydrogenase subunit gamma {ECO:0000313|EMBL:ENO79364.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
Quinohemoprotein amine dehydrogenase subunit gamma
Ig7659_scaffold_277_10
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11179..12306
DNA (1128bp) protein (376aa)
peaD; quinohemoprotein amine dehydrogenase subunit beta PeaD (EC:1.4.9.1)
Quinohemoprotein amine dehydrogenase subunit beta PeaD {ECO:0000313|EMBL:CDF84256.1}; EC=1.4.9.1 {ECO:0000313|EMBL:CDF84256.1};; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
quinohemoprotein amine dehydrogenase subunit beta PeaD n=1 Tax=Marinobacterium stanieri RepID=UPI00025580A0 rbh
Ig7659_scaffold_277_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..13130
DNA (561bp) protein (187aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=5083750 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphoglycerate mutase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_277_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13167..13550)
DNA (384bp) protein (128aa)
hypothetical protein; K09131 hypothetical protein id=5083749 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_277_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13560..15764)
DNA (2205bp) protein (735aa)
Primosomal protein N id=1300391 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
primosomal protein N' rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16175..17269)
DNA (1095bp) protein (365aa)
hemE; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=5083775 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hemE; uroporphyrinogen decarboxylase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17426..17797
DNA (372bp) protein (124aa)
Transposase n=3 Tax=Amycolatopsis mediterranei RepID=D8HU82_AMYMU
transposase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig7659_scaffold_277_16
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17880..18140
DNA (261bp) protein (87aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29168.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig7659_scaffold_277_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18569..19201)
DNA (633bp) protein (211aa)
periplasmic/membrane thiol peroxidase id=5083779 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
periplasmic/membrane thiol peroxidase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19403..21613)
DNA (2211bp) protein (737aa)
Cytochrome c biogenesis protein transmembrane subunit id=1300397 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
thiol:disulfide reductase
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21885..23108
DNA (1224bp) protein (408aa)
Cyclopropane-fatty-acyl-phospholipid synthase id=1300398 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
methyltransferase domain protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23105..23848)
DNA (744bp) protein (248aa)
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain containing protein id=1300399 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
threonyl/alanyl tRNA synthetase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_277_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23894..24727
DNA (834bp) protein (278aa)
Creatininase id=1300400 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
creatininase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24728..25411)
DNA (684bp) protein (228aa)
Uncharacterized protein id=1300401 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
phosphoglycerate mutase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_23
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25587..27923
DNA (2337bp) protein (779aa)
signal transduction histidine kinase NtrB id=5083785 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
signal transduction histidine kinase NtrB rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_277_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28042..29013)
DNA (972bp) protein (324aa)
threonine ammonia-lyase (EC:4.3.1.19) rbh
Threonine dehydratase id=1300403 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29041..29736)
DNA (696bp) protein (232aa)
Uncharacterized protein id=1300404 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glyoxalase-like domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29733..30611)
DNA (879bp) protein (293aa)
Phenazine biosynthesis protein PhzF family id=1300405 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
antisense-enhancing sequence rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_277_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30608..31780)
DNA (1173bp) protein (391aa)
Transcriptional regulator with HTH domain and aminotransferase domain containing protein id=1300407 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
GntR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_28
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31777..32739)
DNA (963bp) protein (321aa)
hypothetical protein id=5083791 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative transporter, EamA-like family rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_277_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32736..33398)
DNA (663bp) protein (221aa)
Putative threonine efflux protein id=1300409 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_277_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33579..35051
DNA (1473bp) protein (491aa)
GntR family transcriptional regulator id=5083793 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
GntR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 31 in total

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