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Ig7659_scaffold_478

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig7659_scaffold_478_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..896)
DNA (753bp) protein (251aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] id=5080459 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amino acid ABC transporter, ATP-binding protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_478_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(883..1533)
DNA (651bp) protein (217aa)
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein id=5080458 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amino acid ABC transporter permease rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_478_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1526..2197)
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter inner membrane subunit id=1270552 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
polar amino acid ABC transporter inner membrane subunit rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_478_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2225..3016)
DNA (792bp) protein (264aa)
Extracellular solute-binding protein id=1270551 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
extracellular solute-binding protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..3765)
DNA (753bp) protein (251aa)
GntR family transcriptional regulator id=5080454 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
GntR family transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3947..4771)
DNA (825bp) protein (275aa)
hypothetical protein id=5080453 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4866..6263
DNA (1398bp) protein (466aa)
UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23) rbh
Bifunctional protein GlmU id=1270548 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6278..6973)
DNA (696bp) protein (232aa)
Uncharacterized protein id=5080451 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7060..7569)
DNA (510bp) protein (170aa)
AsnC family transcriptional regulator id=5080450 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
AsnC family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7705..9567
DNA (1863bp) protein (621aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=5080449 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16) rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9650..10711
DNA (1062bp) protein (354aa)
hypothetical protein id=5080448 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10789..11964
DNA (1176bp) protein (392aa)
Extracellular solute-binding protein family 1 id=1270543 bin=GWE1_Burkholderiales_65_30 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
putative ABC transporter solute-binding protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig7659_scaffold_478_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11937..13604
DNA (1668bp) protein (556aa)
binding-protein-dependent transport system inner membrane protein; K05778 putative thiamine transport system permease protein id=5080446 bin=GWF1_Burkholderiales_GWF1_66_17 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
binding-protein-dependent transport system inner membrane protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13606..14244
DNA (639bp) protein (213aa)
ABC transporter related id=1270541 bin=GWE1_Burkholderiales_65_30 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14405..15025)
DNA (621bp) protein (207aa)
Putative uncharacterized protein id=1270540 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15033..15707)
DNA (675bp) protein (225aa)
family 2 glycosyl transferase id=5080443 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyl transferase family protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15759..18044)
DNA (2286bp) protein (762aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=5080442 bin=GWF1_Burkholderiales_GWF1_66_17 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
selenide, water dikinase rbh
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18132..18662)
DNA (531bp) protein (177aa)
DoxX id=1270537 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
DoxX
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18712..19482)
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=1270536 bin=GWE1_Burkholderiales_65_30 species=Marinobacter algicola genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig7659_scaffold_478_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19487..20527)
DNA (1041bp) protein (347aa)
hypothetical protein; K09930 hypothetical protein id=5080439 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
UPF0276 protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20567..20890)
DNA (324bp) protein (108aa)
integral membrane protein-like protein id=5080438 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
integral membrane protein-like protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig7659_scaffold_478_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21223..22239)
DNA (1017bp) protein (339aa)
Putative oxidoreductase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLE0_VARPD rbh
putative oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:AGU53366.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Ig7659_scaffold_478_23
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22273..22752)
DNA (480bp) protein (160aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958035
Uncharacterized protein {ECO:0000313|EMBL:EWS63159.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein
Ig7659_scaffold_478_24
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22784..22897)
DNA (114bp) protein (38aa)
Aldehyde dehydrogenase, thermostable {ECO:0000313|EMBL:EWS63135.1}; EC=1.2.1.5 {ECO:0000313|EMBL:EWS63135.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
aldehyde dehydrogenase (EC:1.2.1.5)
aldehyde dehydrogenase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AA4F
Displaying 24 items

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